| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 711204 | 283 (0.600) | 13 (0.030) | 6/104 | NT | 5.0% | coding (337/495 nt) | ybfP | lipoprotein |
| ? | CP009273 | = 711218 | 231 (0.530) | coding (351/495 nt) | ybfP | lipoprotein | |||||
Only 100 of 439 total aligned reads displayed.
TATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCGGATTTTT > CP009273/711137‑711271 | tatGTCATCTCAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTTCAGCTCATTTTTTATGCGGG < 1:16731547‑M1/68‑1 (MQ=255)tatGTCAGCACAAGAAACGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGG < 1:20048836‑M1/68‑1 (MQ=255)tatGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGG < 1:2198645‑M1/68‑1 (MQ=255)tatGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGG < 1:17387490‑M1/68‑1 (MQ=255) atGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGt > 1:2710141/1‑68 (MQ=255) atGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGt > 1:2215417/1‑68 (MQ=255) atGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGt > 1:28893392/1‑68 (MQ=255) tGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGtt > 1:568632/1‑68 (MQ=255) tGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGtt > 1:25752124/1‑68 (MQ=255) tGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGtt > 1:2785834/1‑68 (MQ=255) tGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGtt > 1:620417/1‑68 (MQ=255) tGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGtt > 1:6392390/1‑68 (MQ=255) tGTCAGCACAAGAAAAGGTCGGGTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGtt > 1:392768/1‑68 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGttt > 1:32324487/1‑67 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGttt > 1:22813157/1‑67 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGttt > 1:12593493/1‑67 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGttt > 1:10534892/1‑67 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGttt > 1:34493486/1‑67 (MQ=255) tCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCGACACATCAGTTTTTATGCGGGttt > 1:4757430/1‑67 (MQ=255) cAGCACTAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTg < 1:3283644/67‑1 (MQ=255) cAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTg < 1:32421677/67‑1 (MQ=255) acaAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAgg > 1:1579340/1‑68 (MQ=255) acaAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAgg > 1:27369410/1‑68 (MQ=255) acaAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAgg > 1:8775157/1‑68 (MQ=255) acaAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAgg > 1:37847117/1‑68 (MQ=255) aGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCa > 1:10020726/1‑68 (MQ=255) aGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCa > 1:13433572/1‑68 (MQ=255) aaaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCaa > 1:27649857/1‑67 (MQ=255) aaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAg > 1:18835200/1‑67 (MQ=255) aaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGc > 1:26008757‑M2/1‑67 (MQ=255) aaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGc > 1:37174409‑M2/1‑67 (MQ=255) aaaGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGc > 1:8186181‑M2/1‑67 (MQ=255) aaaGGTCGGTTTAAATCCCGGGTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGc > 1:1521455‑M2/1‑67 (MQ=255) aGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGccc < 1:24541472‑M2/68‑4 (MQ=255) aGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGccc < 1:3694622‑M2/68‑4 (MQ=255) aGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGccc < 1:293809‑M2/68‑4 (MQ=255) aGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGccc < 1:12330730‑M2/68‑4 (MQ=255) cGGTTTGAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGc < 1:9274545/67‑1 (MQ=255) cGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGc < 1:30106997/67‑1 (MQ=255) cGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGc < 1:11548518/67‑1 (MQ=255) cGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGc < 1:12121695/67‑1 (MQ=255) cGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGc < 1:14459872/67‑1 (MQ=255) aaaTCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGAc < 1:30267960/68‑1 (MQ=255) aaaTCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGAc < 1:13600478/68‑1 (MQ=255) aaTCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGAcc < 1:35005172/68‑1 (MQ=255) aaTCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGAcc < 1:20258152/68‑1 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGCCCGa > 1:37417821/1‑68 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGa > 1:35674430/1‑68 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGa > 1:31791196/1‑68 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGa > 1:29005610/1‑68 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGa > 1:18101525/1‑68 (MQ=255) tCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGa > 1:4369890/1‑68 (MQ=255) ccGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcccgcataaaaaatgagg > 1:31076458‑M2/1‑50 (MQ=255) ccGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATa > 1:14285104/1‑68 (MQ=255) ccGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATa < 1:23502756/68‑1 (MQ=255) cGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGcccgcataaaaaatgaggt > 1:11359557‑M2/1‑49 (MQ=255) cGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAg < 1:28493741/68‑1 (MQ=255) ggTTGGCAATGCTACAGCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGt < 1:21129307/68‑1 (MQ=255) ggTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGt < 1:5354300/68‑1 (MQ=255) ttGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTc < 1:9591030/67‑1 (MQ=255) ttGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTc < 1:10266562/67‑1 (MQ=255) ttGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTc < 1:19251468/67‑1 (MQ=255) ttGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTc < 1:29654625/67‑1 (MQ=255) ttGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCa > 1:35491204/1‑68 (MQ=255) ttGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCa > 1:29225879/1‑68 (MQ=255) tGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCaa < 1:17604613/68‑1 (MQ=255) tGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCaa < 1:4979003/68‑1 (MQ=255) tGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCaa < 1:7874374/68‑1 (MQ=255) tGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCa < 1:36155041/67‑1 (MQ=255) ggCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAAt < 1:7538329/68‑1 (MQ=255) aTGCTACACCTCATTTTTTATGCGGGTTTGCCTTGGCAAGCCCGGCACTCGACCGATAGTCAATGacg < 1:2041844/68‑3 (MQ=255) aTGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAgg < 1:36485861/68‑1 (MQ=255) tGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGa < 1:16444996/68‑1 (MQ=255) tGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGa < 1:34144463/68‑1 (MQ=255) gCTACACCTCATTTTTTATGCGGGcttgccctggcaaacccgcataaaaaatgaggtgtagcattgcc > 1:31490848‑M1/1‑24 (MQ=255) gCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGAt > 1:26490498/1‑68 (MQ=255) cTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGAtt > 1:15003301/1‑68 (MQ=255) cTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGAtt > 1:38084225/1‑68 (MQ=255) tACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTa > 1:3017926/1‑68 (MQ=255) cacCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATg < 1:29867753/68‑1 (MQ=255) cacCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGAATATg < 1:7335115/68‑1 (MQ=255) acCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATg > 1:24975309/1‑67 (MQ=255) acCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATg > 1:33815513/1‑67 (MQ=255) acCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATg > 1:28259314/1‑67 (MQ=255) ccTCATTTTTTATGCGGGcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgg > 1:24370557‑M1/1‑18 (MQ=255) ccTCATTTTTTATGCGGGcttgccctgacaaacccgcataaaaaatgaggtgtagcattgccaaccgg > 1:27787571‑M1/1‑18 (MQ=255) ttttATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGaaa > 1:23890717/1‑68 (MQ=255) ttttATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGaaa > 1:38346231/1‑68 (MQ=255) ttttATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGaaa > 1:38768096/1‑68 (MQ=255) ttttATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGaaa > 1:1082739/1‑68 (MQ=255) ttttATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGaaa > 1:33677800/1‑68 (MQ=255) aTGCGGTTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCgg < 1:26548767/68‑1 (MQ=255) cGGGcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgggatttaaaccgac < 1:30698228‑M1/67‑64 (MQ=255) cGGGcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgggatttaaaccgac < 1:12774641‑M1/67‑64 (MQ=255) cGGGcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgggatttaaaccgac < 1:8632428‑M1/67‑64 (MQ=255) cGGGcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgggatttaaaccgac < 1:21666097‑M1/67‑64 (MQ=255) gggcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgggatttaaaccgacct < 1:33465015‑M1/68‑66 (MQ=255) gggTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCGGAtt < 1:19758445/67‑1 (MQ=255) gcttgccctggcaaacccgcataaaaaatgaggtgtagcattgccaaccgggatttaaaccgaccttt > 1:13103406‑M1/1‑1 (MQ=255) gcttgcactggcaaacccgcataaaaaatgaggtgtagcattgccaaccgggatttaaaccgaccttt > 1:17789775‑M1/1‑1 (MQ=255) | TATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCGGATTTTT > CP009273/711137‑711271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |