| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1280805 | 451 (0.960) | 22 (0.050) | 4/96 | NT | 5.6% | coding (211/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 |
| ? | CP009273 | = 1280852 | 352 (0.870) | coding (258/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 | |||||
Only 100 of 711 total aligned reads displayed.
GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGG > CP009273/1280739‑1280871 | gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:2141469‑M1/67‑1 (MQ=255)gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:19570372‑M1/67‑1 (MQ=255)gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:30367510‑M1/67‑1 (MQ=255)gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:34145486‑M1/67‑1 (MQ=255) tttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGcc < 1:33776930/67‑1 (MQ=255) ttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCAc < 1:10939513/68‑1 (MQ=255) acgacgATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:31667603/1‑68 (MQ=255) cgacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCa < 1:18576894/68‑1 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:9068316/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:23614664/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:34637823/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:7012807/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:13332053/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:5469340/1‑66 (MQ=255) acgaGGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACt < 1:36031356/68‑1 (MQ=255) cgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACt < 1:38412839/67‑1 (MQ=255) gagggATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGt < 1:27422679/65‑1 (MQ=255) gaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGt < 1:2887426/68‑1 (MQ=255) gaTGGAGCCGCTCGATGCCCAGGCTCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGt < 1:14620106/68‑1 (MQ=255) tCCGCTCGATTCCCATGCGCAGTACAGCGAACTGTTCGACCGTGTCCTCGCCACGTCACTGTTGCTGt < 1:23946115/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTg < 1:38942347/67‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTg < 1:32015614/67‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTg < 1:37250256/67‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:33154445/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:5955369/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:21697816/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:10411015/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:2126483/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt > 1:13157190/1‑68 (MQ=255) cGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGttt < 1:27754688/68‑1 (MQ=255) cGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGttt < 1:33476251/68‑1 (MQ=255) cTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:35032152/1‑68 (MQ=255) cTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:23133161/1‑68 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGaa < 1:11424124/68‑1 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:15795487/1‑67 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:6657779/1‑67 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:4640327/68‑1 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:26260465/68‑1 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:29943701/68‑1 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:753552/68‑1 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:573546/68‑1 (MQ=255) gCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgt > 1:17646760/1‑68 (MQ=255) cccAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgt > 1:6195911/1‑67 (MQ=255) ggCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACg > 1:25777002/1‑68 (MQ=255) ggCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACg > 1:20611014/1‑68 (MQ=255) ggCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACg > 1:12327914/1‑68 (MQ=255) ctgcgccagcaggtccaccatcgccTGGCCGCGCCCCGGCACGGTTGGTGTTTGGACATGTGCACGGc < 1:22741176‑M1/43‑1 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACgg > 1:27076263/1‑67 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACg < 1:21787477/66‑1 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGc > 1:27987575/1‑68 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGc > 1:31010845/1‑68 (MQ=255) tACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAAt > 1:24477850/1‑67 (MQ=255) aCAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATc > 1:17224894/1‑67 (MQ=255) aCAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATc < 1:18221753/67‑1 (MQ=255) aCAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATc > 1:32537977/1‑67 (MQ=255) aCAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATc > 1:20989980/1‑67 (MQ=255) cAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATccc > 1:30227583/1‑68 (MQ=255) gCGAACTGTTCGCCCGTGGCCGCGgtcgcggggttcgccgtgcacatgttcaaacagcaacagtgacg > 1:16843449‑M1/1‑24 (MQ=255) gCGAACTGTTCGACCGTGGGCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgc > 1:7381880/1‑68 (MQ=255) gCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgc > 1:28362464/1‑68 (MQ=255) gCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgc > 1:10046888/1‑68 (MQ=255) gCGAACTGTTCGACCGNGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgc > 1:11919186/1‑68 (MQ=255) gAACTGTTCGACCGTGGCCGCGgtcgcggggttcgccgtgcacatggtcaaaccgcaacagtgacgtg > 1:26568399‑M1/1‑22 (MQ=255) gAACTGTTCGACCGTGGCCGCGgtcgcgggattggccgtgcacatgttcaaacagcaacagtgacgtg > 1:12678393‑M1/1‑22 (MQ=255) gAACTGTTCGACCGTGGCCGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtg > 1:5192717‑M1/1‑22 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGGACGGGGAATCCcgcg > 1:8674693/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:26970785/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:36573405/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:37955005/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:22215621/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:24756051/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:25367861/1‑67 (MQ=255) aCTGTTCGACCGTGGCCGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggc > 1:37516065‑M1/1‑20 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGAc < 1:21511248/67‑1 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACc < 1:35583774‑M2/68‑2 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcggc > 1:2014408‑M2/1‑62 (MQ=255) ccTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc < 1:36954032‑M1/66‑1 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:8288605/1‑68 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:9600221/1‑68 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:13674113/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:24181760‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:4217546‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:30759200‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:1622455‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:31292420‑M1/1‑68 (MQ=255) gCCGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcga > 1:25541995‑M1/1‑6 (MQ=255) GCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg < 1:14015023‑M1/68‑1 (MQ=255) GCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg < 1:14314701‑M1/68‑1 (MQ=255) GCCGCGCCACGTCACTGTTGCTGGTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:35279836‑M1/1‑67 (MQ=255) ccGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcga < 1:19875755‑M1/67‑63 (MQ=255) ccGCGgtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcga > 1:36404‑M1/1‑5 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtgg < 1:2971709‑M1/68‑1 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtgg < 1:15044489‑M1/68‑1 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtgg < 1:19322832‑M1/68‑1 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg > 1:29398098‑M1/1‑67 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg > 1:25189987‑M1/1‑67 (MQ=255) cgcggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgccgtggcgcggccacggtcgag > 1:15314102‑M1/1‑4 (MQ=255) cgcggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaac > 1:7962987‑M1/1‑4 (MQ=255) cgcggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaac > 1:1895660‑M1/1‑4 (MQ=255) CGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtggtgg < 1:36655986‑M1/68‑1 (MQ=255) | GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGG > CP009273/1280739‑1280871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |