| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2229998 | 214 (0.450) | 15 (0.040) | 8/92 | NT | 5.3% | intergenic (+19/+224) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit |
| ? | CP009273 | = 2230012 | 358 (0.920) | intergenic (+33/+210) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit | |||||
Only 100 of 545 total aligned reads displayed.
GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTA > CP009273/2229932‑2230065 | gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:6389741‑M1/67‑1 (MQ=255)gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:15483682‑M1/67‑1 (MQ=255) gaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTgg > 1:23895816/1‑68 (MQ=255) gaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTgg > 1:6758754/1‑68 (MQ=255) agtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGt < 1:4983581/67‑1 (MQ=255) tttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGtt > 1:20432614/1‑66 (MQ=255) ttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGtt > 1:35073733/1‑65 (MQ=255) ttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGtt > 1:20364167/1‑65 (MQ=255) aaGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGt < 1:28815799/68‑1 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:3254361‑M2/67‑2 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:30499276‑M2/67‑2 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:21248863‑M2/67‑2 (MQ=255) aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg > 1:28254412‑M2/1‑65 (MQ=255) aaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTCGTTCCTGTCg > 1:9283870‑M2/1‑65 (MQ=255) ggCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGCCGCATCCGGCATTTGGTTCCTGTCgccgg < 1:33268364‑M2/68‑6 (MQ=255) ggCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTTGTTCCTGTCgccgg < 1:28673963‑M2/68‑6 (MQ=255) cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccgg > 1:37590893‑M2/1‑61 (MQ=255) aagcaCCCCCGCTAACGTTTAAAAACCAGAGCCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCgg < 1:8367868/67‑1 (MQ=21) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg > 1:12229790‑M2/1‑56 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:38642715‑M2/66‑11 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCgg < 1:10998492/67‑1 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGc < 1:14901003/68‑1 (MQ=255) agaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCt < 1:14603182/68‑1 (MQ=255) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:13347800/1‑68 (MQ=255) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa > 1:18965466/1‑68 (MQ=255) acCCGGTAACGTTGTAAAACCAGAGACGCATGCGGCATTTGGTTCCTGTCgccggatgcgtctctggt > 1:32326341‑M2/1‑50 (MQ=255) acCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAAc > 1:25365398/1‑68 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:33731456/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:30425953/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:7512234/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:38382643/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:27803575/68‑1 (MQ=255) ggTAACGTGGTAAAACCAGAGACGCATCAGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCT < 1:36672302‑M1/68‑1 (MQ=255) aaCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTA > 1:20734734‑M1/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAT > 1:17137060‑M1/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAT > 1:15117736‑M1/1‑67 (MQ=255) gTTGTAAAACCAGCCCCGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttacaacgt > 1:25063486‑M2/1‑40 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGC < 1:34843063‑M1/68‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGC < 1:8808846‑M1/68‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGC < 1:12634101‑M1/68‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGC < 1:14390489‑M1/68‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGG > 1:16819257‑M1/1‑67 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGG < 1:15948925‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTA < 1:30791677‑M1/68‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:22104254‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:10387504‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:3527814‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:31365233‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:7898773‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:29705253‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:15755319‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:16185101‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:38894162‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:17837257‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:23352108‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:5983120‑M1/67‑1 (MQ=255) aacccagaGACGCACCCGGCgacaggaaccaaatgccggatgcggctctggttttacaacgttaccgg < 1:24710231‑M1/65‑49 (MQ=255) aaCCAGAGACGCATCCGGCATTTGGTGCCTGTCgccggatgcgtctctggttttacaacgttaccggg > 1:27326821‑M2/1‑33 (MQ=255) aCCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaccgttaccgggt > 1:22851421‑M1/1‑18 (MQ=255) aCCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggt > 1:12428797‑M1/1‑18 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTTCAA > 1:10761013‑M1/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA > 1:16668888‑M1/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA > 1:480555‑M1/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA > 1:19399511‑M1/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA > 1:36810921‑M1/1‑68 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:19655329/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:37399511/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:27037230/1‑68 (MQ=255) cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:11429861/1‑67 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:29237411/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc < 1:17373627/65‑1 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:36256387/1‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:35985610/1‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCCTGAACGCCTTATCCGGCCTACAAAACCAt > 1:9736475/1‑67 (MQ=255) cgcgTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:1853059/66‑1 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt < 1:12785984‑M1/66‑57 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt > 1:22496288‑M1/1‑10 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:13936279/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:33918516/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:19082207/66‑1 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc > 1:5438152/1‑68 (MQ=255) cGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc > 1:11782832/1‑68 (MQ=255) gCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACa < 1:21464401/68‑1 (MQ=255) aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACaaa < 1:34177944/68‑1 (MQ=255) ccGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgcc < 1:23564917‑M1/68‑64 (MQ=255) ccGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcg > 1:18133834‑M1/1‑5 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:26164123/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:2175415/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:31992390/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:10935191/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:21095115/68‑1 (MQ=255) ccGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc < 1:3569117/68‑1 (MQ=255) ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg > 1:26622057/1‑68 (MQ=255) ggCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg < 1:34637760/68‑1 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaccgttaccgggtgttctttctcgccttt < 1:25656330‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:10141487‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:4388627‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:33108839‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgtactttctcgcctt > 1:32746354‑M1/1‑1 (MQ=255) cATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGt < 1:30073433/67‑1 (MQ=255) | GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTA > CP009273/2229932‑2230065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |