| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2436000 = | 323 (0.680) | 19 (0.050) | 8/94 | NT | 6.3% | coding (758/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | 2436103 = | 296 (0.750) | coding (861/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 618 total aligned reads displayed.
AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCC > CP009273/2435934‑2436067 | ccctggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagcc < 1:25588104‑M1/2‑1 (MQ=255) gggCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:4457722‑M1/1‑67 (MQ=255) ggCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:20660332‑M1/1‑68 (MQ=255) ggCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:19183266‑M1/1‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:38548521‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:35592507‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:5383797‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:26409198‑M1/64‑68 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:11574519‑M1/1‑67 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:16415809‑M1/1‑67 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:12033583‑M1/1‑67 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:37087744‑M1/1‑67 (MQ=255) cTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCG > 1:23039271‑M1/1‑67 (MQ=255) tttGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC < 1:30576455‑M1/68‑1 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:25981907‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:20346189‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:17971381‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:32013673‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:15079735‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:4254326‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:12537368‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCg < 1:32212712‑M1/8‑1 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt < 1:8483697‑M1/9‑1 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:34298435‑M1/60‑68 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt < 1:19995897‑M1/9‑1 (MQ=255) gggCGCAAACGGTAAATTCTTTGCGGGTTGATTTAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:9519924/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg > 1:5541864/1‑68 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:32583316/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:6804603/68‑1 (MQ=255) gcgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg < 1:2702785/67‑1 (MQ=255) cgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGt < 1:34651980/67‑1 (MQ=255) cgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGt < 1:21738673/67‑1 (MQ=255) aaaCGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTaa < 1:22204297/68‑1 (MQ=255) aaCGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAAc < 1:25100340/68‑1 (MQ=255) cGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCg < 1:31028515/68‑1 (MQ=255) cGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCg < 1:29346556/68‑1 (MQ=255) cGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCg < 1:8251550/68‑1 (MQ=255) aaTGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACgg < 1:22827460/68‑1 (MQ=255) aTGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACggg < 1:17164249/68‑1 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:9357996/1‑68 (MQ=255) tttGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagc < 1:37672738/68‑1 (MQ=255) ttGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagca < 1:34907766/68‑1 (MQ=255) gCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagcagc < 1:26113804/68‑1 (MQ=255) ggggTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCaa > 1:2242796/1‑68 (MQ=255) ggggTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCaa > 1:30185489/1‑68 (MQ=255) ggTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAAc > 1:10017449/1‑68 (MQ=255) gTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACg > 1:2893376/1‑68 (MQ=255) tGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGt < 1:23934391/42‑1 (MQ=255) aTGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACggg < 1:1013208/67‑1 (MQ=255) ggAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGaa > 1:27689600/1‑67 (MQ=255) ggAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCACCAGCAAACGGGaa > 1:19369188/1‑67 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAAGGGGAAgcg > 1:7168076/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:28012275/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:16750011/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:18852778/1‑68 (MQ=255) aaCAGACATTACCGCCCCCCTGCTCCGCGCCGTGGGTTACCCGCACGGGCAGCAGCAAACGGGAAgc < 1:28555094/67‑1 (MQ=255) aGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggcg > 1:14117775/1‑68 (MQ=255) aCATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAt > 1:18548303/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGa < 1:15543202/66‑1 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:6009412/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:16178170/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGGTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAt < 1:6268037/67‑1 (MQ=255) aCCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCTCGGGCAGCAGCTAACGGGTAGCGGCGATTATcg > 1:8923402/1‑68 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:33799401/1‑67 (MQ=255) gttacctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc < 1:12227279‑M1/56‑1 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGACGCGGCGATTATcggc > 1:21334630/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAATCGGGAAGCGGCGATTATcggcg > 1:34514429/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:4076879/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:15343376/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt > 1:7885143/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt > 1:4801442/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt > 1:359645/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt < 1:33294488/68‑1 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt < 1:3283197/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:5653774/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:3901017/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:11029365/68‑1 (MQ=255) ccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtggt > 1:13672200/1‑68 (MQ=255) gCTCCGCGCCGTaatagcgccagcgacaccaacgcgctggcaataccaccgccgataatcgccgcgt > 1:6630001‑M1/1‑12 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:31539396/1‑68 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:29549735/1‑68 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:12969466/1‑68 (MQ=255) tCCGCGCCGTaatagcgccagcgacaacaacgcgctggcaataccaccgccgataatcgccgcttccc > 1:23629398‑M1/1‑10 (MQ=255) tCCGCGCCGTGGTTTAACCGCCCGGGCAGCAGCAAACGGGAGGCGGCCAGTATCGGCGGTGGTATTg > 1:31276765/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCTGCAGCAAACGGGAAGCGGCGAGTATCGGCGGGGGTATTg > 1:13475983/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAACCGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:2463003/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:7049541/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:10389106/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:7718746/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:10747421/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:5034437/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:14593713/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:3727106/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:15984941/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:35359779/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:21044898/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:26564710/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:28742370/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGCGCAGCAGCAAACGGGAAGCGGCCATTATCGGCGGTGGTAttc > 1:36599800/1‑66 (MQ=255) gCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGc > 1:23291142‑M1/2‑68 (MQ=255) | AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCC > CP009273/2435934‑2436067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |