| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2930783 = | NA (NA) | 16 (0.040) | 5/90 | NT | NA | intergenic (+65/‑14) | fucI/fucK | L‑fucose isomerase/L‑fuculokinase |
| ? | CP009273 | 2930811 = | NA (NA) | coding (15/1449 nt) | fucK | L‑fuculokinase | |||||
Only 100 of 988 total aligned reads displayed.
TAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGT > CP009273/2930716‑2930849 | cctgacattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaatat < 1:23691024‑M1/1‑1 (MQ=255)cctgacattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaatat < 1:17411796‑M1/1‑1 (MQ=255) tgacattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaatata < 1:3749753‑M1/2‑1 (MQ=255) tACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAg > 1:3959881/1‑67 (MQ=255) acattggtcgcgccacagtcgagtacaaggataacttcttgtttcataatcgctcctgcaataTAGcc < 1:34384360‑M1/5‑1 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:18116188/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:17744869/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:4750846/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:4596393/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:16701102/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:33012739/1‑68 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc > 1:35457692‑M1/63‑67 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCg < 1:9652813‑M1/6‑1 (MQ=255) cATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCg < 1:2572792/68‑1 (MQ=255) cATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCg > 1:11893681/1‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:20298560‑M1/62‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:23163962‑M1/62‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:7592103‑M1/62‑68 (MQ=255) aTTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCgg > 1:21101961/1‑68 (MQ=255) ttACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa < 1:3095164/68‑1 (MQ=255) ggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa > 1:1869704‑M1/59‑68 (MQ=255) aCTCCGTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTAGTTAGCCGGATa > 1:8530934/1‑68 (MQ=255) aCTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGTCTGAACAAGCAAGAGTGGTTAGCCGGATa > 1:25480326/1‑68 (MQ=255) aCTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa > 1:10005554/1‑68 (MQ=255) aCTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa > 1:31586578/1‑68 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:38259147‑M1/10‑1 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:12340027‑M1/10‑1 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcaaaatcgctcctgaaaaaTAGCCCGATa < 1:36436818‑M1/10‑1 (MQ=255) cTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa < 1:32031156/68‑1 (MQ=255) cTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa < 1:27727078/68‑1 (MQ=255) cTCCCTGATGTGATGCCCGGGCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa < 1:35026516/68‑1 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:29854087/1‑67 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:2063349/1‑67 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:38810139/1‑67 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc < 1:8225466/68‑1 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc > 1:6188559/1‑68 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc > 1:25277005/1‑68 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc > 1:23924957/1‑68 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc > 1:10465319/1‑68 (MQ=255) gatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATg > 1:11351485/1‑68 (MQ=255) gatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATg > 1:24515992/1‑68 (MQ=255) atgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt > 1:9352428/1‑68 (MQ=255) atgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt > 1:5107150/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGGCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:12576473/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:29554767/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:34716159/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:34089799/1‑68 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:20004745/1‑67 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:19049087/1‑67 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:30214596/1‑67 (MQ=255) caggCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:7263466/4‑67 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg < 1:22319467/68‑1 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg < 1:30629603/68‑1 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:19353859/1‑68 (MQ=255) agCCCGGTCGCTCCGGCTACCTGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg < 1:6469937/67‑1 (MQ=255) cccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:22587634/1‑66 (MQ=255) cccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:26587560/1‑66 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:19514550/67‑1 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:16309653/67‑1 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCt > 1:4230924/1‑68 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCt < 1:24244983/68‑1 (MQ=255) ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:21497664/68‑1 (MQ=255) ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:13774768/68‑1 (MQ=255) ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:15197737/68‑1 (MQ=255) ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:15520658/68‑1 (MQ=255) ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat > 1:33200290/1‑68 (MQ=255) ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGGTAGCCGGATAAGCAATGTTATCCGGCtat < 1:22814061/68‑1 (MQ=255) accaggataacttcttgtttcataatcgctcctgcaataTAGCCGGTTAAGCAATGTTATCCGGCtat < 1:29383931‑M1/29‑1 (MQ=255) accaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATTAGCAATGTTATCCGGCtat < 1:14842553‑M1/29‑1 (MQ=255) gTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata > 1:28456017/1‑68 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:37369991/67‑1 (MQ=255) cGCTCTGGCTACCGGGCCTGAACAAGCAATAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:27258011/68‑1 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:1345588/68‑1 (MQ=255) tCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGc < 1:17078154/67‑1 (MQ=255) ataacttcttgtttcataatcgctcctgcaataTAGCCGGTTAAGCAATGTTATCCGGCTATAttgga < 1:5590960‑M1/35‑3 (MQ=255) cGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAgg < 1:11643373/68‑1 (MQ=255) aacttcttgtttcataatcgctcctgcaataTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAgg < 1:28175367‑M1/37‑1 (MQ=255) gCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGa > 1:32381935/1‑67 (MQ=255) cTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGc > 1:7065757/1‑68 (MQ=255) ccGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt < 1:14441160/68‑1 (MQ=255) ccGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt < 1:21985954/68‑1 (MQ=255) ccGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt < 1:8960357/68‑1 (MQ=255) cGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAtt < 1:14149403/68‑1 (MQ=255) gggCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTa > 1:3366872/1‑68 (MQ=255) gggCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTa > 1:35789783/1‑68 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACa < 1:26038440/67‑1 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:36158784/68‑1 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:18455329/68‑1 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:10715700/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:11094675/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:1207041/1‑68 (MQ=255) aagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGtt < 1:13054209/68‑1 (MQ=255) agagTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTa > 1:37796203/1‑68 (MQ=255) ggTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATcc < 1:27044798/66‑1 (MQ=255) ggTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCt < 1:31828692/67‑1 (MQ=255) ggTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTg > 1:5980965/1‑68 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:24989707‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:36900703‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:15926829‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:28914233‑M1/1‑67 (MQ=255) | TAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGT > CP009273/2930716‑2930849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |