| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3614378 = | 0 (0.000) | 8 (0.020) | 4/96 | NT | 100% | coding (1827/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor |
| ? | CP009273 | 3614473 = | NA (NA) | coding (1922/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor | |||||
Only 100 of 219 total aligned reads displayed.
GCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGA > CP009273/3614312‑3614445 | ggtcaagtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCg > 1:20275880‑M1/67‑68 (MQ=255)ggtcaagtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCg > 1:16192611‑M1/67‑68 (MQ=255)ggtcaagtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCg > 1:31833624‑M1/67‑68 (MQ=255)ggtcaagtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCg > 1:14602420‑M1/67‑68 (MQ=255)ggtcaagtacatcggaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCg > 1:20087519‑M1/67‑68 (MQ=255) tcaagtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtccgt > 1:18100801‑M1/65‑66 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:24069663‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg > 1:25915679‑M1/61‑67 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:26270323‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:16892776‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:15455624‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg > 1:32766487‑M1/61‑67 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:3345103‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg > 1:34206750‑M1/61‑67 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:37157875‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:10792851‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:8054258‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:12392939‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:11035322‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:6306271‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacgg < 1:6732556‑M1/7‑1 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtacggacg > 1:37489560‑M1/61‑66 (MQ=255) cggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc < 1:7476843‑M1/8‑1 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:13000454‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:25595646‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:19805246‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:2612820‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:27890790‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:17945956‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:28681388‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:2935719‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:5831214‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:3783294‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:32112467‑M1/60‑67 (MQ=255) ggatgacccgtccggcagcatcgtattccatactgcgcgtcagcccgccctgcgtggtaCGGACGgc > 1:14002369‑M1/60‑67 (MQ=255) caagtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgca < 1:14727376‑M1/5‑1 (MQ=255) caagtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgc > 1:26466090‑M1/64‑67 (MQ=255) aagtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgca < 1:23663814‑M1/5‑1 (MQ=255) aagtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgca < 1:11675061‑M1/5‑1 (MQ=255) agtacatcgtaacggatggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:26733644‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:32509102‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:11738836‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:12019247‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:13398650‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:32640954‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:31503933‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:31293146‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:29807574‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:27959363‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:24039781‑M1/62‑68 (MQ=255) agtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc < 1:24446626‑M1/7‑1 (MQ=255) agtacatcgtaacggaaggtggggtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:13542527‑M1/62‑68 (MQ=255) agtacatcggaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:12619637‑M1/62‑68 (MQ=255) gtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtccggctgc > 1:33135419‑M1/61‑64 (MQ=255) gtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:4618395‑M1/61‑67 (MQ=255) gtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:28192878‑M1/61‑67 (MQ=255) gtacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagc > 1:20863432‑M1/61‑67 (MQ=255) tacatcgtaagggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagca < 1:33731455‑M1/8‑1 (MQ=255) tacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagca < 1:28976302‑M1/8‑1 (MQ=255) tacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagca < 1:12931354‑M1/8‑1 (MQ=255) tacatcgtaacggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGgcagca < 1:10138128‑M1/8‑1 (MQ=255) acggaaggtggtgtggctgccgttttcactggtcaggcggatgacccgtcCGGCAGCAGAAACGGGac > 1:410418‑M1/51‑68 (MQ=255) tactgcgcgtcagcccgccctgcgtggtaCTGACGGCATCAGAAACGGGACACAGTACGATGCGTggg > 1:18929958‑M1/30‑68 (MQ=255) cactggtcaggcggatgacccgtcCGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGccg > 1:29663186‑M1/25‑68 (MQ=255) cccggcCGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAgggcg < 1:37253086‑M1/62‑1 (MQ=255) caCGGACGGCAGCAGAAACGGGACACACTACGATGCCTCGGGAAAGGCCGTCCGTACCACGCAgggcg < 1:9511606‑M1/66‑1 (MQ=255) aCGGACGGCAGCAGAAACCGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCCCGcagggctg < 1:27142590‑M1/67‑3 (MQ=255) CGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAgggcggg > 1:9144983‑M1/1‑68 (MQ=255) CGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAgggcggg > 1:21312199‑M1/1‑68 (MQ=255) CGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAgggcggg > 1:8005005‑M1/1‑68 (MQ=255) CGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAgggcggg > 1:11507367‑M1/1‑68 (MQ=255) CGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAgggcggg > 1:33925269‑M1/1‑68 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCCCGctggccggggt < 1:13627519‑M1/67‑3 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCCCGCAGGGCGGGCTg < 1:1933864‑M1/68‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCt < 1:24930839‑M1/67‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCt < 1:38877547‑M1/67‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCt > 1:16843768‑M1/1‑67 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCt > 1:27773174‑M1/1‑67 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCt < 1:66201‑M1/67‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCt < 1:14992819‑M1/67‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:18316811‑M1/68‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:26300594‑M1/68‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:11269580‑M1/68‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:3852626‑M1/68‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:3805495‑M1/68‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:26113643‑M1/68‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:30821779‑M1/68‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:25707506‑M1/68‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCAGTCCGTACCACGCAGGGCGGGCTg < 1:28449609‑M1/68‑1 (MQ=255) ACGGCAGCAGAAACGGGACACAGTACGAAGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:35988993‑M1/68‑1 (MQ=255) CGGCAGCAGAACCGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGa > 1:17391956‑M1/1‑68 (MQ=255) CGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGTGGGCTGa > 1:35786640‑M1/1‑68 (MQ=255) CGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:38726540‑M1/67‑1 (MQ=255) CGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:36719720‑M1/67‑1 (MQ=255) CGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:34540656‑M1/67‑1 (MQ=255) CGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:11025258‑M1/67‑1 (MQ=255) CGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:8935878‑M1/67‑1 (MQ=255) CGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:23044356‑M1/67‑1 (MQ=255) CGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:14258478‑M1/67‑1 (MQ=255) CGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGa > 1:21758636‑M1/1‑68 (MQ=255) | GCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGA > CP009273/3614312‑3614445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |