| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4604006 = | 657 (1.390) | 4 (0.010) | 3/100 | NT | 0.68% | coding (709/780 nt) | yjjV | putative DNase |
| ? | CP009273 | 4604021 = | 590 (1.400) | coding (724/780 nt) | yjjV | putative DNase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 693 total aligned reads displayed.
GCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAG > CP009273/4603954‑4604087 | cgtAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCTGGTGACCGGCGGa > 1:8763553/3‑68 (MQ=255) cTAACCGCCCGGATCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcggcgg < 1:11018528/66‑1 (MQ=255) aCCGCCCGGAGCAGGCTGCGCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgag < 1:38727313/68‑1 (MQ=255) aCCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgag > 1:915413/1‑68 (MQ=255) aCCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgag < 1:37246833/68‑1 (MQ=255) aCCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgag < 1:16004930/68‑1 (MQ=255) ccGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgaga < 1:12717049/68‑1 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:21517922/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:21329482/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:33284984/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:17693566/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:31540655/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:31339770/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:30823127/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:302304/1‑68 (MQ=255) cGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgcg < 1:20016978/68‑1 (MQ=255) gCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCaa > 1:32062902/1‑67 (MQ=255) aGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAg < 1:5153083/66‑1 (MQ=255) gCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:38973243/1‑68 (MQ=255) gCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt < 1:35675119/68‑1 (MQ=255) cTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:25236309/1‑67 (MQ=255) cTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:25008003/1‑67 (MQ=255) cTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:3254792/1‑67 (MQ=255) cTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:16291340/1‑67 (MQ=255) cTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:2976103/1‑67 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:28012034/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:32220722/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:33705445/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:34042747/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:22733722/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:34991815/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:10420379/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:36006606/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:12120467/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:8101690/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:7239386/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:13941665/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:14316842/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:17125606/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:36295167/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:18566540/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:19061642/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:1928679/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:1969355/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCCGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:35180591/68‑1 (MQ=255) tGCCCGTGTGTTCGCCGGGCTTTGCGAGGTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:35466055/68‑1 (MQ=255) gCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCt > 1:30602180/1‑68 (MQ=255) cccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:20719446/66‑1 (MQ=255) ccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCtt < 1:20965715/67‑1 (MQ=255) ccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTta > 1:29213785/1‑68 (MQ=255) ccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTta < 1:29408113/68‑1 (MQ=255) ccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTta < 1:239813/68‑1 (MQ=255) gtgtgtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTtaat < 1:23379492/68‑1 (MQ=255) tgtgtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTtaata > 1:29994917/1‑68 (MQ=255) tgtgtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTtaata > 1:22187603/1‑68 (MQ=255) tgtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAac > 1:2562529/1‑68 (MQ=255) tgtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATCAGATTGCGCAAGCGTTGCTTAATAac > 1:1012255/1‑68 (MQ=255) tttCGCGGGGCTTTGCGTGTTGCGCCGGGAACCGGCCGATGAGATCGCGCAAGCGTTGCTTAATAaca < 1:6820360/67‑1 (MQ=255) gtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCTGATGAGATTTCGCAAGCGTTGCTtaataaga < 1:594059/68‑3 (MQ=255) gtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAaca < 1:30490836/68‑1 (MQ=255) gtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAaca < 1:7593848/68‑1 (MQ=255) gtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAaca < 1:2756781/68‑1 (MQ=255) gtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAaca < 1:5586538/68‑1 (MQ=255) gtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAaca < 1:36883127/68‑1 (MQ=255) gtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAac > 1:9467021/1‑67 (MQ=255) gtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAac < 1:13323431/67‑1 (MQ=255) tCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACg < 1:38019420/68‑1 (MQ=255) tCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACg < 1:4472544/68‑1 (MQ=255) tCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACg < 1:13115178/68‑1 (MQ=255) tCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACg < 1:11735654/68‑1 (MQ=255) tCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACg < 1:20190293/68‑1 (MQ=255) tCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACg < 1:22415189/68‑1 (MQ=255) tCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACg < 1:33499748/68‑1 (MQ=255) tCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACg > 1:27792345/1‑68 (MQ=255) tCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACg > 1:2678189/1‑68 (MQ=255) gCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGta > 1:15508174/1‑68 (MQ=255) gCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGta > 1:32910144/1‑68 (MQ=255) cGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGtat < 1:6604303/67‑1 (MQ=255) tttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACgttg < 1:38378841/68‑1 (MQ=255) tttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACgttg < 1:37569793/68‑1 (MQ=255) ttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACgttgt < 1:24414217/68‑1 (MQ=255) ttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACgttgt < 1:28784368/68‑1 (MQ=255) ttGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACgttgt < 1:15148645/68‑1 (MQ=255) cGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTa > 1:26500343/1‑68 (MQ=255) gAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTa > 1:10771789/1‑67 (MQ=255) gcgcCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTg > 1:33106530/1‑67 (MQ=255) gcgcCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGc < 1:29878566/68‑1 (MQ=255) gcgcCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGc < 1:28418517/68‑1 (MQ=255) gcgcCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGc < 1:14798449/68‑1 (MQ=255) GCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGcc > 1:1785433‑M1/1‑67 (MQ=255) GCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGcc > 1:4898828‑M1/1‑67 (MQ=255) GCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCg < 1:34819061‑M1/68‑1 (MQ=255) CCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGt < 1:16681569‑M1/68‑1 (MQ=255) CGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGt > 1:27138907‑M1/1‑67 (MQ=255) gAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAgg > 1:31815553/1‑67 (MQ=255) aaCCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGc < 1:18301626/67‑1 (MQ=255) aCCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCg < 1:24317051/68‑1 (MQ=255) aCCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCg < 1:34557434/68‑1 (MQ=255) cggcgGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGa < 1:1737250‑M2/63‑1 (MQ=255) ggcgGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGAt > 1:8419936‑M2/5‑68 (MQ=255) | GCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAG > CP009273/4603954‑4604087 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |