| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 394482 | NA (NA) | 6 (0.010) | 5/98 | NT | NA | coding (308/309 nt) | yaiY | DUF2755 family inner membrane protein |
| ? | CP009273 | = 394503 | NA (NA) | coding (287/309 nt) | yaiY | DUF2755 family inner membrane protein | |||||
Only 100 of 413 total aligned reads displayed.
CAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGG > CP009273/394437‑394569 | cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTg < 1:25471715/68‑1 (MQ=255)cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTg < 1:19483870/68‑1 (MQ=255)cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTg < 1:35318608/68‑1 (MQ=255)cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT > 1:24101072‑M2/1‑67 (MQ=255)cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT > 1:26045116‑M2/1‑67 (MQ=255)cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT < 1:20538670‑M2/67‑1 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg > 1:935833/1‑67 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg > 1:25200608/1‑67 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGcc < 1:19134313/68‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:28103823/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:14778712/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:36925435/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:31910451/67‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTGAAACTTACTGGCGGCGATGTCGTCAGTGCAGCCATa > 1:5669075/1‑67 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATa > 1:33507762/1‑67 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATa < 1:20434699/67‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATa < 1:7635125/67‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAg < 1:21974204/68‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAg < 1:29749223/68‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAg < 1:26830142/68‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAg < 1:10201332/68‑1 (MQ=255) aGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcg < 1:18158254/68‑1 (MQ=255) aGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcg < 1:12336544/68‑1 (MQ=255) aGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcg < 1:3087281/68‑1 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcgc > 1:30395571/1‑67 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:34369567/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:7574828/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:25923265/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:1610368/1‑68 (MQ=255) gCGATTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCTTAgcgc > 1:18890581/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGcccc > 1:13161975/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc < 1:15759418/67‑1 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:37163741/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:37623969/1‑67 (MQ=255) gTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGccac < 1:16841481/68‑1 (MQ=255) ttCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGccacc < 1:35077309/67‑1 (MQ=255) tgcagGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTaagttttacattgtcaga > 1:38508936‑M2/3‑50 (MQ=255) tCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGccacc > 1:20038207/1‑66 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:33298621/68‑1 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:27467100/68‑1 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:387213/68‑1 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:34818/68‑1 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:966147/68‑1 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:21811397/68‑1 (MQ=255) cAGGACGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:31647410/68‑1 (MQ=255) gCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCa > 1:17383911/1‑68 (MQ=255) ccGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGc < 1:23066221/66‑1 (MQ=255) cGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaaa < 1:19702459/68‑1 (MQ=255) aTCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaaaaa < 1:17866311/67‑1 (MQ=255) tCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATg > 1:12875238/1‑68 (MQ=255) tCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATg > 1:4342186/1‑68 (MQ=255) gACAATGTAAAACTTCCTGCCGGCGATGGCGCCAGTaagttttacattgtcagatgcggcctgaaacg > 1:32904067‑M2/1‑36 (MQ=255) aCAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGc > 1:11865662/1‑68 (MQ=255) aCAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGc > 1:630511/1‑68 (MQ=255) aCAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGc > 1:34126721/1‑68 (MQ=255) aCAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGc > 1:33845066/1‑68 (MQ=255) cAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:28493242/1‑68 (MQ=255) aaTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:17610694/1‑67 (MQ=255) aTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc < 1:11048082/68‑1 (MQ=255) aTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc < 1:8471815/68‑1 (MQ=255) aTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc < 1:14291769/68‑1 (MQ=255) gTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCGCCACTGCAAAAATGAGGCAGCct < 1:26206634/68‑1 (MQ=255) gTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCct > 1:21050811/1‑68 (MQ=255) aaaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac < 1:22464704/68‑1 (MQ=255) aaaaCTTACTGGAGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac < 1:22858153/68‑1 (MQ=255) acatACTGGCGGCGATGTCTCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGACAACTaa > 1:2337870/4‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:7811561/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:38158115/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:10456291/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:18324889/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:28901375/1‑68 (MQ=255) ttACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaa > 1:15380179/1‑68 (MQ=255) ttACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaa < 1:5108974/68‑1 (MQ=255) ttACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaa < 1:13557194/68‑1 (MQ=255) tACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaaa < 1:3243024/68‑1 (MQ=255) tACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaaa < 1:11420940/68‑1 (MQ=255) tACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaaa < 1:35788530/68‑1 (MQ=255) tACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaaa < 1:30513266/68‑1 (MQ=255) tACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaa > 1:25712986/1‑67 (MQ=255) ggcggcGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACggg > 1:2367258/1‑68 (MQ=255) ggcggcGATGTCGCCAGTGCAGCCATAGAGCCACCACTGCAAAATTGAGCCCGCCTCCTAAAACCggg > 1:29376799/1‑68 (MQ=255) gATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGc < 1:24222053/68‑1 (MQ=255) gATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGc < 1:32164854/68‑1 (MQ=255) gATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGc < 1:36753350/68‑1 (MQ=255) gATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGc < 1:6558904/68‑1 (MQ=255) gATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGc < 1:7307036/68‑1 (MQ=255) aTGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGc > 1:15105085/1‑67 (MQ=255) tGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGcc < 1:5522861/67‑1 (MQ=255) cGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaa > 1:4159224/1‑68 (MQ=255) gCCAGTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatc > 1:14129936‑M2/1‑6 (MQ=255) gCCAGTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatc > 1:8705313‑M2/1‑6 (MQ=255) gCCAGTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatc > 1:6866540‑M2/1‑6 (MQ=255) gCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaa > 1:26612621/1‑68 (MQ=255) gCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaa < 1:38919465/68‑1 (MQ=255) ccAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGTTCAGCCCGaaaa > 1:8251995/1‑68 (MQ=255) ccAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaaa > 1:17114702/1‑68 (MQ=255) ccAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaaa > 1:21476866/1‑68 (MQ=255) ccAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaaa > 1:3457578/1‑68 (MQ=255) aGTaagttttacattgtcagatgctgcctgaaacgccttatctgtcctgacattcatgtttgatcact > 1:31373832‑M2/1‑3 (MQ=255) gTGCAGCCATAGCGCCACCACTGCAAAATTGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATgg > 1:36334588/1‑68 (MQ=255) | CAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGG > CP009273/394437‑394569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |