| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 902734 | 225 (0.480) | 20 (0.050) | 8/98 | NT | 9.1% | coding (1005/1431 nt) | ybjT | putative NAD‑dependent oxidoreductase |
| ? | CP009273 | = 902785 | 205 (0.500) | coding (954/1431 nt) | ybjT | putative NAD‑dependent oxidoreductase | |||||
Only 100 of 312 total aligned reads displayed.
AGCAGCAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCCTCTT > CP009273/902719‑902852 | agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:37240417‑M2/68‑2 (MQ=255)agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:7651076‑M2/68‑2 (MQ=255)agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:29942529‑M2/68‑2 (MQ=255)agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:3446951‑M2/68‑2 (MQ=255)agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:28036998‑M2/68‑2 (MQ=255)agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:1204243‑M2/68‑2 (MQ=255)agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:4078853‑M2/68‑2 (MQ=255)agcagaAAGGATGGCGGACGTTTTAACGGTAAACCCCGCCTGGTTGGCAAAATACCCGTACTCCGGTc < 1:517763‑M2/68‑2 (MQ=255) gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:11790845‑M2/67‑2 (MQ=255) gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:10915968‑M2/67‑2 (MQ=255) gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:19836854‑M2/67‑2 (MQ=255) gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:15694512‑M2/67‑2 (MQ=255) agcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgcc < 1:5596895‑M2/68‑5 (MQ=255) aaGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagc < 1:38350125‑M2/68‑8 (MQ=255) ggCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCgg > 1:34902047/1‑68 (MQ=255) cTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCggg < 1:22798449/67‑1 (MQ=255) cTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCgg < 1:7134003/66‑1 (MQ=255) ggACGTTTTAACGGTAATCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg < 1:37998315/68‑1 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgct > 1:17587902‑M2/1‑52 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgct > 1:32376577‑M2/1‑52 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgc > 1:25262966‑M2/1‑52 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg < 1:6389376/68‑1 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg < 1:31361140/68‑1 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg < 1:2629161/68‑1 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg < 1:16489057/68‑1 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg < 1:35116259/68‑1 (MQ=255) ggACGTTTTAACGGCAAACCCCGCCTGGTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgc > 1:25817979‑M2/1‑52 (MQ=255) cGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGcc < 1:10230647/67‑1 (MQ=255) cGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGcc < 1:24757782/67‑1 (MQ=255) cGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGcc < 1:9091598/67‑1 (MQ=255) cGTTTTAACGGTAAACCCCGCCGGGTTGGCAAAATAACCGTACTCCGGTCGCCCGCGGGCAAAGGcc < 1:36839313/67‑1 (MQ=255) tttAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGa < 1:14978214/67‑1 (MQ=255) tttAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGa < 1:14182974/67‑1 (MQ=255) ttAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGc < 1:18282086/68‑1 (MQ=255) aaCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgt < 1:5808060/68‑1 (MQ=255) aaCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgt < 1:26906507/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGTAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:17439724/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:34254218/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:5088646/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:13868318/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:8271002/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:39136610/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:27434101/68‑1 (MQ=255) cGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcg > 1:37676405/1‑68 (MQ=255) cGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcg < 1:24122121/68‑1 (MQ=255) ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt > 1:33363119/1‑68 (MQ=255) ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt > 1:36354860/1‑68 (MQ=255) ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt > 1:10575877/1‑68 (MQ=255) ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt > 1:12954958/1‑68 (MQ=255) ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt > 1:20424967/1‑68 (MQ=255) aaaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAg < 1:3691005/67‑1 (MQ=255) aaaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGc < 1:25612993/68‑1 (MQ=255) aaCCCCGCCTGTTTGGCAAAATACCCGTACTCCGGTcgccagccttgctgctttatggcaggtagtga > 1:1954607‑M2/1‑36 (MQ=255) aaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgctttatggcaggtagtga > 1:23533286‑M2/1‑36 (MQ=255) aaCCCCGCCGGTTTGGCCAAATAACCGTACTCCGGGcgccagccttgctgctttatggcaggtagtga > 1:4858855‑M2/1‑36 (MQ=255) ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcccc > 1:37847118/1‑68 (MQ=255) ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcccc < 1:10010509/68‑1 (MQ=255) ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcccc > 1:9373679/1‑68 (MQ=255) ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcccc > 1:26623723/1‑68 (MQ=255) ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcccc > 1:6016682/1‑68 (MQ=255) cccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCa > 1:15235397/1‑68 (MQ=255) cccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCa > 1:28401499/1‑68 (MQ=255) ccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAg < 1:31186300/68‑1 (MQ=255) gCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc < 1:19354508/68‑1 (MQ=255) gCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc > 1:17751867/1‑68 (MQ=255) gCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc < 1:3298545/68‑1 (MQ=255) gCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc > 1:38912173/1‑68 (MQ=255) gCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc < 1:23198140/68‑1 (MQ=255) ttGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGa < 1:6691607/68‑1 (MQ=255) ttGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGa < 1:15949489/68‑1 (MQ=255) ttGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCACTGGa < 1:13307238/68‑1 (MQ=255) aaaaTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGa < 1:38756862/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:9646720/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:21243403/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:31729398/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:30494206/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:22138425/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCCGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:461895/68‑1 (MQ=255) ccGTACTCCGGTCGCGAGCGGGCAAAGGGATGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGttt < 1:12222862/68‑1 (MQ=255) cGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtttt > 1:7415845/1‑68 (MQ=255) cGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtttt > 1:35452533/1‑68 (MQ=255) cGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtttt > 1:14701904/1‑68 (MQ=255) gTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGttttt < 1:1712730/68‑1 (MQ=255) gTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGttttt < 1:15603067/68‑1 (MQ=255) tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct > 1:27894510/1‑67 (MQ=255) tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct > 1:29808382/1‑67 (MQ=255) tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct > 1:32008156/1‑67 (MQ=255) tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct > 1:20730271/1‑67 (MQ=255) ccGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcctcc < 1:19943944/68‑1 (MQ=255) ccGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct > 1:29298036/1‑66 (MQ=255) cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTcctcct < 1:12410419/68‑1 (MQ=255) cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTcctcct < 1:33714046/68‑1 (MQ=255) ggTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcctcc > 1:11312323/1‑66 (MQ=255) ggTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcctcc > 1:1890849/1‑66 (MQ=255) tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct < 1:20170306/67‑1 (MQ=255) tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct < 1:21493211/67‑1 (MQ=255) tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct < 1:21809762/67‑1 (MQ=255) tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct < 1:22406691/67‑1 (MQ=255) tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct < 1:29066809/67‑1 (MQ=255) tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct < 1:32729837/67‑1 (MQ=255) | AGCAGCAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCCTCTT > CP009273/902719‑902852 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |