| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 910536 = | NA (NA) | 9 (0.020) | 6/92 | NT | 5.3% | intergenic (‑223/+272) | ybjE/aqpZ | putative transporter/aquaporin Z |
| ? | CP009273 | 910538 = | 195 (0.410) | intergenic (‑225/+270) | ybjE/aqpZ | putative transporter/aquaporin Z | |||||
Only 100 of 524 total aligned reads displayed.
ACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAG > CP009273/910471‑910605 | atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:26185965‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:25777938‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:25394713‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:27566280‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:30630242‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:31094165‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:8396224‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:19582120‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:33912076‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:36863994‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:16166421‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:3710405‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:14858271‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgccaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:31747201‑M2/1‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGGGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:8730166/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:108554/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:3893525/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:28212853/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:13249330/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:2374252/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:22340631/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:17085830/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:20898138/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:20717762/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:11682889/1‑68 (MQ=255) tcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAt > 1:25929827‑M2/67‑68 (MQ=255) tGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGAtg < 1:38742914/68‑1 (MQ=255) tGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGAtg < 1:28816492/68‑1 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccccatccAtg > 1:18746051‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:4579740‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:1764725‑M2/66‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacctccAtgt > 1:35489404‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:19301185‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:3509434‑M2/65‑68 (MQ=255) ttacggctcccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg < 1:6576847‑M2/6‑1 (MQ=255) ttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg < 1:32251184‑M2/6‑1 (MQ=255) ttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg < 1:23115929‑M2/6‑1 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:10759411/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:29281840/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:10504689/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:21392250/1‑68 (MQ=255) tacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcggcccacatccATGTgg > 1:7569670‑M2/62‑67 (MQ=255) ccGATGTTGGTTGCTTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTggg < 1:23997522/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGACGGCCGGGGCAGCCCACATGGATGTggg < 1:17940668/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTggg < 1:11320166/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:27005424/1‑67 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:29685364/1‑67 (MQ=255) ccGATGTTGGGGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTggg < 1:21763977/68‑1 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccccatccATGTgg > 1:12637362‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacctccATGTgg > 1:38361849‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:10376235‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:18402256‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:13519458‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaaaatccctgtaaaacgcgccctcagcccacatccATGTGGGc > 1:34637721‑M2/61‑68 (MQ=255) cggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:3801770‑M2/60‑65 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccccctccATGTGGGCt > 1:820929‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:4075398‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:33653866‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:18966805‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:16835789‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:36246035‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:7418003‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:1200738‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:10048160‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:934581‑M2/59‑67 (MQ=255) ggctaccggatcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:30943504‑M2/59‑67 (MQ=255) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:16355223/1‑68 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:7769175/1‑68 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:28543351/1‑68 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:20479432/1‑68 (MQ=39) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:22590391‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:24970512‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:22856618‑M2/58‑67 (MQ=255) ctaccggggcgggcgcgagttaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTGa < 1:5857925‑M2/11‑1 (MQ=255) tggtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAgg < 1:29589444/67‑1 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:15872600/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:24313033/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:20023436/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:1304796/1‑67 (MQ=35) tggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:27263153/1‑68 (MQ=35) ggCGTCAAAAGCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:2333188/67‑1 (MQ=25) gTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtt < 1:35641452/67‑1 (MQ=35) gTCAAAATCGCCGAGGCGGTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtt < 1:37704673/67‑1 (MQ=25) cgggcgcgaggaaacatccctgaaaaccgcgccctcagcccacatccATGGGGGCTGAGGGCGCGtt < 1:12902533‑M2/20‑1 (MQ=255) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:16620070/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:37503873/67‑1 (MQ=35) aTCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGTTGTGGGCTGAGGGCGCGTTTTACAgg < 1:7133869/68‑1 (MQ=25) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:34297886/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:5661251/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:30308864/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:15371852/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:22072711/68‑1 (MQ=33) tCGCCGAGGCGGTCCCTGAAGGCGGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:4855271/68‑1 (MQ=255) cGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:601440/68‑1 (MQ=31) cGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:3290494/68‑1 (MQ=31) cGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:13809770/68‑1 (MQ=31) cGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:14373883/68‑1 (MQ=31) ggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:91053‑M2/29‑1 (MQ=255) ATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATaa > 1:8062591‑M2/1‑67 (MQ=255) ATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATaa < 1:325575‑M2/67‑1 (MQ=255) | ACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAG > CP009273/910471‑910605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |