| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1940291 | 248 (0.530) | 29 (0.070) | 10/96 | NT | 7.8% | intergenic (‑58/+81) | ruvA/yobI | component of RuvABC resolvasome, regulatory subunit/uncharacterized protein |
| ? | CP009273 | = 1940293 | 473 (1.170) | intergenic (‑60/+79) | ruvA/yobI | component of RuvABC resolvasome, regulatory subunit/uncharacterized protein | |||||
Only 100 of 606 total aligned reads displayed.
CCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAA > CP009273/1940226‑1940358 | ccTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGgataga > 1:34498160/1‑68 (MQ=255) cTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGgataga < 1:11749837/67‑1 (MQ=255) cTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGgataga < 1:4167781/67‑1 (MQ=255) cTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGgataga < 1:36121260/67‑1 (MQ=255) aTCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGAtat > 1:37492235‑M2/1‑65 (MQ=255) cacaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGAtatcc > 1:19669287‑M2/1‑63 (MQ=255) cacaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGAtatcc > 1:29321537‑M2/1‑63 (MQ=255) acaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGAtatcca < 1:11447646‑M2/68‑7 (MQ=255) acaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGAtatcca < 1:14376656‑M2/68‑7 (MQ=255) aTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGAtatccagc > 1:12054406‑M2/1‑60 (MQ=255) gACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGa < 1:19087022/68‑1 (MQ=255) gACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGa > 1:16613736/1‑68 (MQ=255) gACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGa > 1:26114165/1‑68 (MQ=255) gACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGa > 1:12799995/1‑68 (MQ=255) cGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAg < 1:28375067/68‑1 (MQ=255) tCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGa < 1:8186783/67‑1 (MQ=255) ccTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATg > 1:7548308/1‑68 (MQ=255) cTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATga < 1:21058401/68‑1 (MQ=255) aaTGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGaaa > 1:17280952/1‑67 (MQ=255) aaTGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGaaa > 1:26739796/1‑67 (MQ=255) tGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACt < 1:31135572/68‑1 (MQ=255) tGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACt > 1:25205384/1‑68 (MQ=255) tGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACt < 1:10570987/68‑1 (MQ=255) gAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACtt > 1:22491/1‑68 (MQ=255) aGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgt < 1:6074613/68‑1 (MQ=255) aGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgt < 1:5505144/68‑1 (MQ=255) aGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgt < 1:37789259/68‑1 (MQ=255) aGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgt < 1:9145025/68‑1 (MQ=255) aGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgt < 1:34275135/68‑1 (MQ=255) tactGCTGTATGATAAACAAATGCTGGATAGACATCCAGCGAAGGATGAAGAAAACTTGCGAGgtgt < 1:7235443/64‑1 (MQ=255) tAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtgt < 1:20184579/67‑1 (MQ=255) tAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtgt < 1:35166171/67‑1 (MQ=255) aTGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGTGAGGTGtctc < 1:8471332/68‑1 (MQ=255) tGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgt < 1:6515551/62‑1 (MQ=255) tGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCg > 1:18456540/1‑68 (MQ=255) gTATGATAAAAAAATGCTGGTTAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa < 1:22646708/68‑1 (MQ=255) gTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa < 1:1794902/68‑1 (MQ=255) gTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa < 1:16319265/68‑1 (MQ=255) aTGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa > 1:35671065/1‑66 (MQ=255) aTGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa > 1:33975442/1‑66 (MQ=255) aTGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa > 1:13839024/1‑66 (MQ=255) tGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACt < 1:27786470/68‑1 (MQ=255) gATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTg > 1:23241401/1‑68 (MQ=255) tAAAAAAATGCTGGATAGAtatccagcatttttttatcatacagcattatctttgattcattacgca > 1:33137721‑M2/1‑19 (MQ=255) tAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGa < 1:23501609/67‑1 (MQ=255) tAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGa < 1:13992666/67‑1 (MQ=255) aaaaaaaTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGaaa > 1:13275398/1‑68 (MQ=255) aaaaaaaTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGaaa > 1:29500937/1‑68 (MQ=255) aaaaaaTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGaaaa < 1:36663886/68‑1 (MQ=255) aaaaaTGCTGGATAGAtatccagcatttttttatcatacagcattatctttgattcattacgcaggag > 1:21575462‑M2/1‑16 (MQ=255) aaaaaTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGaaaaa > 1:28256185/1‑68 (MQ=255) aaaaTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAAt < 1:20593807/68‑1 (MQ=255) actgctgcatCGAtatccaccatttttttatcatacagcattatctttgattcattacgcaggagcgt > 1:1119664‑M2/3‑13 (MQ=255) aaTGCTGGATAGAtatccagcatttttttatcatacagcattatctttgattcataacgcaggagcgt > 1:19370566‑M2/1‑13 (MQ=255) aTGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGc < 1:27073788/68‑1 (MQ=255) tGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGc > 1:8995861/1‑67 (MQ=255) tGGATAGATATCCAGCGAAGGATTAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGcaca < 1:10286714/67‑1 (MQ=255) tGGATAGATATCCAGCGAAGGATGAAGTAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGcaca < 1:30582305/67‑1 (MQ=255) tGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGcaca < 1:15023536/67‑1 (MQ=255) tGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGcaca < 1:34853138/67‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:9618825/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:10024313/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:37078432/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:7805610/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:6910703/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:38337395/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:38565023/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:38943711/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:4688407/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:5802605/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:5141590/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:25376305/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:10830481/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:14713950/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:15357958/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:1608280/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:1824021/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:20386067/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:21961118/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:22139760/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:24144468/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:24872286/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:3374423/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:31465181/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:33543521/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:32643906/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:32106650/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:31776824/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:26456061/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:30343774/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:30059570/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:29818908/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:28993268/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:28052525/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:27448747/68‑1 (MQ=255) ggATAGATATCCAGCGAAGGAAGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:25621846/68‑1 (MQ=255) gatagatcACCAGCGAAGGATGAAGAAATCTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGt < 1:12498707/67‑1 (MQ=255) agataTCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATaa < 1:17630292/68‑1 (MQ=255) agataTCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATaa < 1:16785404/68‑1 (MQ=255) agataTCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATaa < 1:13703777/68‑1 (MQ=255) | CCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAA > CP009273/1940226‑1940358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |