| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2590222 = | 354 (0.750) | 30 (0.080) | 11/90 | NT | 10.0% | intergenic (‑126/+42) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase |
| ? | CP009273 | 2590249 = | 253 (0.670) | intergenic (‑153/+15) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase | |||||
Only 100 of 488 total aligned reads displayed.
AGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > CP009273/2590183‑2590315 | aggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAgat < 1:19779472/67‑1 (MQ=255) gaATGAGCGTTCAATGCATATATTCCGATAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAgatgat > 1:5351568/1‑68 (MQ=255) aTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGAtgatga < 1:7830913/68‑1 (MQ=255) tgtacagctggactgatttttctgttcatcaTCTTGCCGTGCCAGCTGGCCGGCAAGATGATGGACAg < 1:2316729‑M1/37‑1 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg > 1:25118076/1‑68 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg > 1:29396835/1‑68 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg > 1:16553258/1‑68 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGGCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg < 1:34395733/68‑1 (MQ=255) gTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg < 1:2693480/66‑1 (MQ=255) gTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg < 1:22520876/66‑1 (MQ=255) cAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGaaaaa < 1:11131251/68‑1 (MQ=255) agctggactgatttttctgttcatcaTCTTGCCGTGCCAGCTGCGCGGCAAGATGATGAACAGaaaaa < 1:21512968‑M1/42‑1 (MQ=255) aTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATc > 1:18451617/1‑68 (MQ=255) tggactgatttttctgttcatcatcttgccgtgcagctggcacggcaagaTGATGAACAGaaaaa < 1:22884799‑M2/15‑1 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGGCAGCTGCCCGGCCAGATGATGAAAACAAAAATAAg > 1:7055849/1‑68 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:22200981/1‑68 (MQ=255) actgatttttctgttcatcaTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGt < 1:25991744‑M1/47‑1 (MQ=255) actgatttttctgtgcatcatcttgccgggcagcgggcacggcaagaTGATGAACAGAAAAATCAGt < 1:28897707‑M2/20‑1 (MQ=255) tatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTcc > 1:5899823/1‑68 (MQ=255) tgatttttctgttcatcatcttgccgtgcagctggcacggcaagaTGATGAACAGAAAAATCAGTCCa < 1:3966996‑M2/23‑1 (MQ=255) atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa < 1:15610567/68‑1 (MQ=255) atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa < 1:19016792/68‑1 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGATCAGAAAAATCAGGccc > 1:9222572/1‑66 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:32280481/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:20883925/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:17707373/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:10286982/1‑67 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:30551684/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:2072805/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:16770631/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:5127830/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:24629161/68‑1 (MQ=255) ttCCGAGAGCGTTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCt < 1:20531503/68‑1 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGGCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCt < 1:7202734/68‑1 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:23532195/1‑65 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:36795574/1‑65 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:33690361/1‑65 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCt < 1:12872245/68‑1 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCt < 1:35612211/68‑1 (MQ=255) ttttctgttcatcatcttgccgtgcagctggcacggcaagaTGATTAACAGAAAAATCAGTCCAGCTg < 1:25826393‑M2/27‑1 (MQ=255) tCCGAGAGCGGTTGTCTTTCCGTGCCAGCTGCCCGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:36402291/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCGGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTg < 1:12240999/68‑1 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCCCGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:37862622/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:29968566/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:14477472/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:13124352/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:13879199/1‑64 (MQ=255) tttctgttcatcatcttgccgcccagctgccacggcaagaTGATGAACAGAAAAATCAGTCCAGCTGt < 1:33199456‑M2/28‑1 (MQ=255) ccGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGGAAGATGATGAACAGAAAAATCAGTCCAGCTGt > 1:9756007/1‑68 (MQ=255) ccGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCCGCTGt > 1:19374927/1‑68 (MQ=255) ccGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGt < 1:3278107/68‑1 (MQ=255) cGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGt > 1:28543477/1‑67 (MQ=255) gagaGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTac < 1:38395772/68‑1 (MQ=255) gagaGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTac < 1:26217760/68‑1 (MQ=255) ctgttcaacatcttgccgtgcagcgggcacggcaagaTGATGAACATAAAAATCAGTCCAGCTGTaca < 1:1046933‑M2/31‑1 (MQ=255) agagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTac > 1:311740/1‑67 (MQ=255) agagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTac > 1:33445679/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTacac > 1:4242510/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTacac > 1:21880870/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATAAGTCCAGCTGTacac > 1:21230378/1‑67 (MQ=255) gCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACAcc < 1:3603900/67‑1 (MQ=255) cGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCa > 1:6837800/1‑68 (MQ=255) ttGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAgg < 1:34117690/67‑1 (MQ=255) CTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGgcggcg < 1:27942574‑M1/68‑1 (MQ=255) tgccgtgcagctggcacggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGcggcgg > 1:11860334‑M2/25‑67 (MQ=255) TGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGcggcgg < 1:20245451‑M1/67‑1 (MQ=255) TGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcggg > 1:26375365‑M1/1‑68 (MQ=255) GCCGTGGCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTGCAGCTGTACACCCCGGCggcgggc < 1:5598966‑M1/68‑1 (MQ=255) CCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggc < 1:12449211‑M1/67‑1 (MQ=255) CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg < 1:35337404‑M1/67‑1 (MQ=255) CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg < 1:17169512‑M1/67‑1 (MQ=255) GCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACg > 1:34654967‑M1/1‑67 (MQ=255) CCAGCTGCACGGCAAGATGATGAACAGAAATTTCAGTCCAGCTGTACACCCAggcggcgggcgccg < 1:2549492‑M1/66‑4 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:31588287/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:8612492/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:24044076/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:11619665/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:37094408/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCt < 1:23268995/68‑1 (MQ=255) cTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCa > 1:15125343/1‑68 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCtt < 1:1804498/65‑1 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCa < 1:4814314/67‑1 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCAt > 1:17669145/1‑68 (MQ=255) acggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAgg < 1:7530765‑M2/59‑1 (MQ=255) acggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAgg < 1:8489351‑M2/59‑1 (MQ=255) acggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAg > 1:4444053‑M2/10‑67 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:10759078‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:27491586‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:38626214‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:38100909‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:17468854‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:34847052‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:18617930‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:10011412‑M2/60‑1 (MQ=255) ggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCt > 1:10151395‑M2/8‑68 (MQ=255) aagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGTCTTCATAGgcttgg < 1:1418091‑M2/64‑3 (MQ=255) aagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCg > 1:1587693‑M2/5‑68 (MQ=255) aagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCg > 1:16132583‑M2/5‑68 (MQ=255) agaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGa > 1:36519202‑M2/4‑68 (MQ=255) agaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGa < 1:30848540‑M2/65‑1 (MQ=255) | AGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > CP009273/2590183‑2590315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |