| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 360096 | 288 (0.820) | 1571 (4.530) | 32/110 | NT | 83.1% | intergenic (‑30/+565) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | CP009273 | 3508417 = | 356 (1.030) | coding (2/678 nt) | rpe | D‑ribulose‑5‑phosphate 3‑epimerase | |||||
Only 100 of 1748 total aligned reads displayed.
GGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/360029‑360096‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAG > CP009273/3508417‑3508483 cagTGATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAA < 1:22775697/65‑1 agTGATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAA > 1:10005256/3‑67 gTGATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAAC > 1:5226357/2‑68 cTGATAAGCTGTCAAACATGAGAATTCCATCCGCATCTCCTTGAGAATTATTTTTTAGCGGGTGAAcc > 1:25274543/2‑66 GATAAGCTGTCAAACGTGAGAATTCCATCCGCTTCGCGGTGAGAATTATTTTTTCGCGGGTGAAACG > 1:5438767/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGA < 1:11766604/68‑1 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGA < 1:20136133/68‑1 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGA < 1:8037799/68‑1 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:24610663/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:18603932/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:25785276/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:1987806/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:3958647/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:16375966/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:4780671/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:14645392/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:13909382/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:957873/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:11541998/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:1201146/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:8204253/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:7137403/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCCGCTTCACCTTGAGAATTATTTTTTCGCGGGATAAACG > 1:28300214/1‑67 GATAAGCTGTCAAACATGAGAATTCCATCAGCTTCTACTTGAGAATTATTTTTTCGAGGGTGAAACG > 1:20809751/1‑67 GATAAGCTGTCAAACATGAGAAATCCATACGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:13277413/1‑67 TAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT < 1:23437784/68‑1 TAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT < 1:5622829/68‑1 TAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT < 1:24216591/68‑1 TAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT < 1:8504983/68‑1 TAAGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT < 1:6766341/68‑1 AGCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCC < 1:13128507/68‑1 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGCCT > 1:13653474/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:22369771/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:24063212/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:9753338/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:22049119/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:24900100/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:26907721/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:27186984/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:28689968/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:3642852/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:4296841/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:4540208/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:6230148/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:7789855/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:8961554/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:15865018/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:14101372/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:18326358/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:14421211/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:19221762/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:12813768/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:14903115/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:15173821/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:16901263/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:16099615/1‑65 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACG > 1:29050802/1‑62 GCTGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAAC > 1:26322796/1‑61 GCTGTCAAACATGAGAATTCAATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACT > 1:22948397/1‑65 TGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGG < 1:28530165/68‑1 TGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGG < 1:3345903/68‑1 TGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGG < 1:17837013/68‑1 TGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGG < 1:5031112/68‑1 TGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGG < 1:18052056/68‑1 TGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGG < 1:2322125/68‑1 TGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGG < 1:20578141/68‑1 TGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGG < 1:25964929/68‑1 TGTCAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCT < 1:21007054/66‑1 CAAACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTT < 1:21308041/67‑1 AACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT < 1:12573951/68‑1 AACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT < 1:1036904/68‑1 AACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT < 1:15458781/68‑1 AACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT < 1:20360058/68‑1 AACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT < 1:17380571/68‑1 AACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT < 1:7377807/68‑1 AACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT > 1:27584374/1‑68 AACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT < 1:17657835/68‑1 ACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGCCTCCTGGTTTGT > 1:1064540/1‑67 ACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTA < 1:11246531/68‑1 ACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTA < 1:17122990/68‑1 ACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTA < 1:9374955/68‑1 ACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT > 1:7600415/1‑67 ACATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGT > 1:12313453/1‑67 ATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACA > 1:16593862/1‑68 ATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACA > 1:2659418/1‑68 ATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACA > 1:23756075/1‑68 ATGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACA > 1:22553215/1‑68 TGAGAATTCCATCCGCTTCTCCTTGATAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAA < 1:5881440/68‑1 TGAGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAA < 1:6557523/68‑1 AGAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAA > 1:1564678/1‑67 GAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAG > 1:18951915/1‑67 GAATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAG < 1:8749576/67‑1 ATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCC < 1:27840238/67‑1 ATTCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCC > 1:19533241/1‑67 TCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGC > 1:21496720/1‑68 TCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGC > 1:10920193/1‑68 TCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGC > 1:13447451/1‑68 TCCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGC > 1:25591417/1‑68 CCATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAG < 1:21823475/62‑1 CATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAG < 1:3012653/68‑1 GGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/360029‑360096‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cATCCGCTTCTCCTTGAGAATTATTTTTTCGCGGGTGAAACGACTCCTGGTTTGTACAAAGCCAGCAG > CP009273/3508417‑3508483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |