| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 442683 | 305 (0.860) | 29 (0.100) | 11/90 | NT | 8.7% | coding (479/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | = 442722 | 363 (1.280) | coding (440/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 154 total aligned reads displayed.
TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/442606‑442683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgccgcCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < CP009273/442722‑442657 TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:9826905/68‑1TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:7544389/68‑1TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:1218065/68‑1TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:2782323/68‑1 AAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:19988314/1‑66 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGCTC > 1:26221396/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT < 1:2570641/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT < 1:6398107/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:17651088/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:22914755/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:16219715/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:24867644/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:26649988/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:3720916/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:6947589/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:7458125/1‑65 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:29212262/1‑67 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:4661546/1‑67 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:14289334/1‑67 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:25754294/1‑67 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:11506047/1‑67 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:9241530/1‑67 GGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGC < 1:23507204/67‑1 GGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGC < 1:19788636/67‑1 AAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCATGATCGCTGCGC < 1:11226818/67‑1 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:4838576/67‑1 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:10504407/67‑1 AATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGC < 1:5497284/68‑1 GGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGT > 1:16687803/1‑68 CACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGGGCGGTACCCGGTGA > 1:11402543/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGGGGTGGGCGGTGAG > 1:316961/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAG > 1:3515980/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAG > 1:7270316/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAG > 1:5920963/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGGGATCGGCGACTGTGCGGTACCCGGTGcg > 1:12044506/1‑66 AGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGT > 1:28207527/1‑67 AGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGT > 1:24466389/1‑67 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGCTCGGCTACTGGGCGGTAACCGGTGAGTTCG > 1:2743253/1‑68 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGGTACTGTGCGGTAACCGGTGAGTTCG > 1:21090787/1‑68 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTTACCGGTGAGTTCG > 1:5123653/1‑68 ATAGCCAGCAGGATCGCTGCGCCGGCGGTGATCGGGTACGGTGCGGTAACCGGTGAGTTCGATAGCG > 1:3631509/1‑67 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTACCCGGTGAGTTCGATAGCGGCGC > 1:3254812/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:560279/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:9180894/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:20416007/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCG > 1:17238304/1‑67 GCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:12940121/1‑68 AGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGc < 1:27799344/67‑2 GGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCCGCGct > 1:16104204/1‑65 TCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:10365545/1‑67 CGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:13101747/1‑66 CGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:28888801/1‑66 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCTCCT > 1:54039/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGC < 1:1350935/67‑1 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGC < 1:408743/67‑1 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:8169522/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:8279265/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:17331722/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:17364511/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:18858572/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:15874386/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:19020232/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:22405900/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTAGATAGCGGCGCAGCGATCCT > 1:6175526/1‑65 GCTGCGCCGCCGGTGATCGGCGACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:2284311/1‑65 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGG < 1:1552687/68‑1 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGG < 1:1304078/68‑1 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:21767238/1‑67 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:19655110/1‑67 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:6080725/1‑67 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:5058932/1‑67 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:4068879/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:16162462/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:11635299/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:2143725/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:20410519/68‑1 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:106172/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:17841438/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:13534520/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:2871784/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:20293895/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAG > 1:21665855/1‑45 GCCGCCGGGGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:15953449/1‑68 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:14038979/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:2344552/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:16910339/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:6362784/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:21716656/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:27308076/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:24563023/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:24021475/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:4398443/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTAT < 1:8460579/67‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTAT < 1:8594994/67‑1 CGCCGGTGATCGGCTACTGTGCGGGAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:25155333/68‑1 CGCCGGTGATCGGCTACTGGGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:11366562/68‑1 GCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT > 1:28777515/1‑68 GCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:3979674/67‑1 GCCGGTGATCGGCTACTGTGCGGTAACCGGGGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < 1:22423218/68‑1 GCCGGTGATCGACTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < 1:7903152/68‑1 TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/442606‑442683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgccgcCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < CP009273/442722‑442657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |