| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 902734 | 157 (0.440) | 10 (0.030) | 5/98 | NT | 6.4% | coding (1005/1431 nt) | ybjT | putative NAD‑dependent oxidoreductase |
| ? | CP009273 | = 902785 | 154 (0.500) | coding (954/1431 nt) | ybjT | putative NAD‑dependent oxidoreductase | |||||
AAATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/902661‑902734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < CP009273/902785‑902719 AAATATTGCCTAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGG < 1:28535702/68‑1AAATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGG < 1:14716086/68‑1AAATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGG < 1:18676843/68‑1 AATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGC < 1:23672189/68‑1 AATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGC < 1:20748207/68‑1 AATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGC < 1:19541855/68‑1 AATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGC < 1:14280391/68‑1 ATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCc > 1:10902827/1‑67 ATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGG < 1:12132402/68‑1 ATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTG > 1:10494188/1‑67 ATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTG > 1:22589003/1‑67 ATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTG > 1:16104105/1‑67 TTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGGC < 1:24744162/68‑1 CGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGGCGAGCGGAGTAGGGTT > 1:18879727/1‑68 GCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCGGGGGGCCGGGGTGCGGgga > 1:18025935/1‑65 ACCTGCCATAAAGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCG > 1:9372578/1‑68 ACCTGCCATAAAGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCG > 1:12375460/1‑68 CCATAAAGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAA > 1:1309387/1‑68 ATAAAGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAAC > 1:406726/1‑68 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:11397034/1‑67 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:14239829/1‑67 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:21010122/1‑67 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGGTTACCGTTAAAACGTCC > 1:848188/1‑67 GGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCT > 1:24388841/1‑68 GGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTT > 1:10256119/1‑65 GGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTT > 1:10289538/1‑65 GGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTT > 1:23523697/1‑65 GGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTT > 1:1479670/1‑65 CGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCT > 1:3169026/1‑66 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAATACGTCCGCCAGCCTTGCTGC < 1:18770603/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:26872391/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:15541155/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:16130186/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:748478/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:5469243/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:28182103/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:26291359/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:2487902/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:18942053/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:10655919/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:28207839/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:15425446/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:24706927/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:17407673/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:18656225/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:21419916/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:8937497/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:927097/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:21022155/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGAGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:11799508/68‑1 AAATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/902661‑902734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < CP009273/902785‑902719 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |