BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3921522	321 (0.910)	22 (0.070)	5/100	NT	7.0%	coding (1442/1452 nt)	viaA	stimulator of RavA ATPase activity; von Willebrand factor domain protein
*	?	CP009273	= 3921534	302 (0.960)	22 (0.070)	5/100	NT	7.0%	coding (1430/1452 nt)	viaA	stimulator of RavA ATPase activity; von Willebrand factor domain protein

Only 100 of 122 total aligned reads displayed.

GTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3921451‑3921522

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  CP009273/3921534‑3921468

GTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGACGGTCCCTTCTCTGCTTTATTAATTTATCG                                                                          >  1:28201764/1‑67

 TTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:12436802/1‑68

 TTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGACCCTTCTCTGCTCTAATAATTAATCGCC                                                                        >  1:21184250/1‑68

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCG                                                                       <  1:13906687/68‑1

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:21983793/1‑67

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:15719387/1‑67

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:16242746/1‑67

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:8854142/1‑67

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        <  1:3624877/67‑1

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:1145144/1‑67

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        <  1:25014407/67‑1

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:10054263/1‑67

   CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:20357166/68‑1

   CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:21479729/68‑1

   CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:23444715/68‑1

   CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:584622/68‑1

   CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:7085950/68‑1

      TGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCCT                                                                    >  1:11853461/1‑67

       GTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCC                                                                     <  1:24087387/65‑1

                                            TTCTCTGCTGTAATAATTTATCGCCGCCTGCTCAGCCGCTGGCGGCGTTAAATTATTACAGCAGAGAA                             >  1:17337050/1‑68

                                               tcgGCTGTAATAATTTATCGCCGCCTGCTAAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:6474959/4‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTGAGCCGCTGGGGGCGATAAATTATTACAGCTGAGAAGGG                          >  1:16455399/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGCCGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:25197307/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTTTTACAGCAGAGAAGGG                          >  1:26391730/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:28656409/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:5030425/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:13143630/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:27762370/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:14717941/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:8642875/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGG                           >  1:18464609/1‑67

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGG                           >  1:21121284/1‑67

                                                    TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:21554965/1‑67

                                                    TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:3324921/1‑67

                                                    TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:10940509/1‑67

                                                       AATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTC                  >  1:6248284/1‑68

                                                                  GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:8008472/1‑67

                                                                  GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:11178571/1‑67

                                                                  GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:24984440/1‑67

                                                                  GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:7138746/1‑67

                                                                  GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:13553659/1‑67

                                                                  GCCGCCTGCTCAGACGCTGGCGGCGAGAAATTATTACAGCAGAGAAGGGACGCTCTCGCGACCAGaa        >  1:21304671/1‑65

                                                                    CGCCTGCTCAGACGCTGGCGGCGATAAATTATTTCAGCAGACAAGGGACGCTCTCGCGAACAGCA        >  1:29167720/1‑65

                                                                    CGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGC      <  1:6572143/67‑1

                                                                    CGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGC      <  1:24481376/67‑1

                                                                    CGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGC      <  1:19766132/67‑1

                                                                    CGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAG       <  1:24377487/66‑1

                                                                     GCCTGCTCTGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:13256280/68‑1

                                                                     GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:19789506/68‑1

                                                                     GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:25646719/68‑1

                                                                     GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:8929376/68‑1

                                                                     GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGC‑‑AGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:13517296/68‑1

                                                                      CCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    >  1:11907107/1‑67

                                                                       CTGCTCAGACGCTGGGGGCGATAAATTATTACAGCAGAGCAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:30113/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAATGGACGCTCTCGCGAACAGCAGCTGGC  <  1:17180020/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGCCGCTCTCGCGAACAGCAGCTGGC  <  1:23548020/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:2948472/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:27866514/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:28428133/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:3012795/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:3303358/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:3646285/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:5288709/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:8688711/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:5533896/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:10674388/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:5910644/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:656559/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:2734876/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:12796156/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:12881673/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:13306117/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:15224940/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:15610366/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:16937146/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:16952526/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:17304844/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:18122253/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:18990323/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:19530637/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:20913996/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:2246726/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:27763831/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:23198900/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:23582223/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:2381345/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:27140572/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:24706461/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:25096429/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:26580689/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:937491/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:890977/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:13160267/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:26773600/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:3079014/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:20893782/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:21580368/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCGCTCGCGAACAGCAGCTGG   <  1:28429658/67‑1

                                                                       CTGCTCAGACGCTGGCGGAGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:26547257/68‑1

                                                                       CTGCGCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:21828337/68‑1

GTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3921451‑3921522

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  CP009273/3921534‑3921468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.