| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 64557 | 257 (0.730) | 14 (0.050) | 8/94 | NT | 5.3% | coding (1224/2352 nt) | polB | DNA polymerase II |
| ? | CP009273 | = 64577 | 289 (0.980) | coding (1204/2352 nt) | polB | DNA polymerase II | |||||
Only 100 of 159 total aligned reads displayed.
ATCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/64483‑64557‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccctggcGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT < CP009273/64577‑64511 ATCAGAAAGGTGCGGATGATCGACGGGTAGAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG < 1:8358110/68‑1ATCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG < 1:27462712/68‑1ATCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG < 1:3444299/68‑1ATCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAA > 1:19301166/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGGTTTTATATTACATCACCAGCACAGAATCATAAAG > 1:26895175/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGC < 1:26767976/68‑1 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGC < 1:5580732/68‑1 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGC < 1:11562591/68‑1 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:4108742/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:22180265/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:3875372/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:12385143/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:8990477/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:26266512/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAG > 1:10553521/1‑67 TCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTGATAGTCCAGCACCAGCACTGAATCATAAAG > 1:25436164/1‑67 CAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCC < 1:2330583/68‑1 AAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTG > 1:8854134/1‑68 AAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTG > 1:16141035/1‑68 AAGGTGCTTATGATCGACGGGTACAGTCTTTTATAGTCCAGCACCATCACTGAATCATAAAGCCCTGG < 1:1415966/68‑1 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG < 1:9190390/68‑1 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG < 1:16575017/68‑1 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTG > 1:21063952/1‑67 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTG > 1:19625917/1‑67 AAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTG > 1:18580551/1‑67 AGGTGCGGATGATCTACGGGTACAGGCTTTTATAGTCCACCACCAGCACTGAATCATAAAGCCCTGG > 1:6128230/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:15597573/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:27390908/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:11045790/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:6966006/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:1455321/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:13308878/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:5429703/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:13235958/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:19880995/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:25976207/68‑1 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:7320540/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:2312485/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:8860832/1‑67 AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGG > 1:2271942/1‑67 CTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCGGGCGGCTGCGTGATGGCTTCCCGGCCAGG > 1:15132412/1‑68 AGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGGTTTAT > 1:28711938/1‑68 ACCAGCACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGT > 1:19095668/1‑68 ACCAGCACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGT > 1:27336939/1‑68 ACCAGCACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGT > 1:13202922/1‑68 CACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGG > 1:24687637/1‑68 ACTGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGT > 1:15462062/1‑68 TGAATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGT > 1:5685718/1‑66 ATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGG > 1:28600840/1‑68 ATCATAAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGG > 1:11209999/1‑68 AAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTAT > 1:26502374/1‑68 AAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTAT > 1:10103280/1‑68 AAAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTAT > 1:1681942/1‑68 AGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAA > 1:4400930/1‑68 AGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAA > 1:20476042/1‑68 GCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCTGTGCTGGTGCTGGACTATAAA > 1:27826164/1‑68 GCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAA > 1:757137/1‑68 GCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAA > 1:29169481/1‑68 GCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAA > 1:2841353/1‑68 GCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAA > 1:17152451/1‑68 CCCTGGCGGCTACGTGATGGATTCCCGGCCTGGGCGTTATGAGTCAGTGCTGGTGCTGGACTATAAAA > 1:25640121/1‑68 CCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGGTGGAGTATAAAA > 1:3138403/1‑68 CCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:18471661/1‑68 CCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:27478193/1‑68 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:26734322/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:24532069/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:16090874/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:5460631/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:7950936/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:19627113/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:13072165/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:21262741/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:10182154/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:22298943/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:11929471/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAA > 1:12765885/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTAAAAAAG < 1:18334818/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGCGCTGGACTATAAAA > 1:11098679/1‑67 CCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCGGGTGCTGGACTATAAAAG < 1:21681371/68‑1 CCTGGCGGCTACGTGATGGATTCACGGCCA‑GGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:26566710/67‑1 CCTGGCGGATACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG < 1:4316244/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:8690199/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:15194377/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:17720919/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:5950531/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:19408277/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:11809725/68‑1 CTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGC < 1:11453379/68‑1 GGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCT < 1:15382468/68‑1 GGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCT < 1:7739436/68‑1 GCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG > 1:6177368/1‑64 GCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAG > 1:28188129/1‑64 CGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:14643044/1‑68 CGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:8508270/1‑68 CGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:21715976/1‑68 CGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:22922657/1‑68 CGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:3898264/1‑68 CGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:25908034/1‑68 CGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT > 1:9533919/1‑68 CGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTG < 1:20332730/67‑1 ATCAGAAAGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/64483‑64557‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccctggcGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGT < CP009273/64577‑64511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |