| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 841021 = | 354 (1.000) | 18 (0.060) | 6/92 | NT | 5.8% | intergenic (‑85/+176) | ybiO/glnQ | mechanosensitive channel protein, intermediate conductance/glutamine transporter subunit |
| ? | CP009273 | 841045 = | NA (NA) | intergenic (‑109/+152) | ybiO/glnQ | mechanosensitive channel protein, intermediate conductance/glutamine transporter subunit | |||||
Only 100 of 462 total aligned reads displayed.
AATAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTG > CP009273/840954‑841087 | taaggcgttcacgccgcatccggcaaaaaagcccgcacgttgtcagcaacctgcttaatatcccttcc > 1:4063711‑M1/67‑68 (MQ=255) taaggcgttcacgccgcatccggcaaaaaagcccgcacgttgtcagcaacctgcttaatatcccttcc > 1:20715007‑M1/67‑68 (MQ=255) aTAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGcc < 1:2123770/68‑1 (MQ=255) tAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGcc > 1:486818/1‑67 (MQ=255) tAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGcc > 1:16483567/1‑67 (MQ=255) ggcgttcacgccgcatccggcaaaaaagcccgcacgttgtcagcaacctgcttaatatcccttcctc < 1:10365392‑M1/4‑1 (MQ=255) gcgttcacgccgcatccggcaaaaaagcccgcacgttgtcagcaacctgcttaatatcccttcctc < 1:10172759‑M1/4‑1 (MQ=255) gCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTccc < 1:5717346/67‑1 (MQ=255) gCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTccc < 1:28936744/67‑1 (MQ=255) cgttcacgccgcatccggcaaaaaagcccgcacgttgtcagcaacctgcttaatatcccttCCTccc > 1:22555825‑M1/62‑67 (MQ=255) cgttcacgccgcatccggcaaaaaagcccgcacgttgtcagcaacctgcttaatatcccttCCTCCCt < 1:7115067‑M1/7‑1 (MQ=255) cgttcacgccgcatccggcaaaaaagcccgcacgttgtcagcaacctgcttaatatcccttCCTCCCt < 1:18402185‑M1/7‑1 (MQ=255) cgttcacgccgcatccggcaaaaaagcccgcacgttgtcagcaacctgcttaatatcccttCCTCCCt < 1:19358949‑M1/7‑1 (MQ=255) cgttcacgccgcatccggcaaaaaagcccgcacgttgtcagcaacctgcttaatatcccttCCTCCCt < 1:13461559‑M1/7‑1 (MQ=255) cgttcacgccgcatccggcaaaaaagcccgcacgttgtcagcaacctgcttaatatcccttCCTCCCt < 1:22785293‑M1/7‑1 (MQ=255) aaGATAAGTATAGATGCTTGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCgg < 1:24883003/68‑1 (MQ=255) tAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGt < 1:14215688/66‑1 (MQ=255) tAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGt < 1:15513541/66‑1 (MQ=255) aaGTATAGATGCTGGAGGAGGGGCGATTTTAAATGATAGGAATCTGGTGTGCCTCCCTTTCGGGTGaa < 1:12045465/68‑1 (MQ=255) aaGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGaa < 1:11341053/68‑1 (MQ=255) gTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAg > 1:23993084/1‑68 (MQ=255) ataGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAggg > 1:9343793/1‑68 (MQ=255) ataGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAggg > 1:19796813/1‑68 (MQ=255) ataGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAggg > 1:26383929/1‑68 (MQ=255) ataGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAggg > 1:356953/1‑68 (MQ=255) ataGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAggg > 1:16316018/1‑68 (MQ=255) ataGATGCTGGAGGAGGGGCGATTTTAAATGAGACGAATCTGGTGTGCCTCCCTTTCGGGGGAAAg < 1:9565083/66‑1 (MQ=255) taGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGgga < 1:10942995/68‑1 (MQ=255) aGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGggag > 1:8402605/1‑68 (MQ=255) aGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGggag > 1:26027938/1‑68 (MQ=255) aTGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGggagga > 1:1767053/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTGAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:6314922/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGggagga < 1:16893200/67‑1 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:9439427/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:21314626/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:7544442/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:25545440/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:15069568/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:23012115/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa < 1:6166455/68‑1 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:67008/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:27105821/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:27853106/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:12351878/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:5333990/1‑68 (MQ=255) tGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa < 1:17185737/68‑1 (MQ=255) tGCTGGAGGAGGGCCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGaa > 1:15783758/1‑68 (MQ=255) tGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAgg < 1:15399603/67‑1 (MQ=255) tGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAgg < 1:24256461/67‑1 (MQ=255) ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGa < 1:26167585/68‑1 (MQ=255) ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGa < 1:9756294/68‑1 (MQ=255) ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTG‑AAGGGAGGAAGGGat < 1:10569787/68‑1 (MQ=255) ggaggaGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTACGGGTGAAAGGCAGGAAgcta > 1:23298612/1‑65 (MQ=255) aggaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAGGGGAGGAAGGGat < 1:11088684/67‑1 (MQ=255) aggaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGata > 1:19213900/1‑68 (MQ=255) aggaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGat < 1:22242729/67‑1 (MQ=255) aggaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGat < 1:18583103/67‑1 (MQ=255) aggaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGat < 1:13870229/67‑1 (MQ=255) aggaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGat < 1:21612531/67‑1 (MQ=255) aggaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGat < 1:16009165/67‑1 (MQ=255) aggaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTCAAAGGGAGGAAGGGat < 1:735404/67‑1 (MQ=255) aggaggGGCGATTTTAAATGAGAGGAATCTGCTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGat < 1:8240052/67‑1 (MQ=255) ggaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGatat > 1:25870956/1‑68 (MQ=255) gaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATAtt > 1:8789703/1‑68 (MQ=255) gaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATAtt > 1:143503/1‑68 (MQ=255) gaggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATAtt > 1:13940009/1‑68 (MQ=255) aggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGatat < 1:9169356/66‑1 (MQ=255) aggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGatat < 1:20912050/66‑1 (MQ=255) aggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATAtt < 1:2005069/67‑1 (MQ=255) aggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTa > 1:27514850/1‑68 (MQ=255) aggGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTa > 1:7910963/1‑68 (MQ=255) gCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGc < 1:18861444/67‑1 (MQ=255) gATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAg < 1:5081737/67‑1 (MQ=255) ttttAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGt < 1:26651810/67‑1 (MQ=255) ttttAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGt < 1:4340835/67‑1 (MQ=255) ttAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGc < 1:21523618/68‑1 (MQ=255) ttAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGc < 1:1000359/68‑1 (MQ=255) tAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCt < 1:28538196/68‑1 (MQ=255) aTGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGAc > 1:12630028/1‑68 (MQ=255) aTGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGAc > 1:23560908/1‑68 (MQ=255) aTGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGAc > 1:3896516/1‑68 (MQ=255) tGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACa > 1:3000603/1‑68 (MQ=255) ttaatatcccttCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGc < 1:3169534‑M1/56‑1 (MQ=255) aaTCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTa < 1:26845184/46‑1 (MQ=255) aatatcccttCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCgg < 1:21897135‑M1/58‑1 (MQ=255) tCTGGTGTGCCGACCTTTCGGGTGAATGTGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGgggg < 1:14861267/68‑1 (MQ=255) cTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCgg > 1:14517775/1‑66 (MQ=255) tGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCt < 1:3376744/68‑1 (MQ=255) atcccttCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCt < 1:10768651‑M1/61‑1 (MQ=255) atcccttCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCt < 1:18091289‑M1/61‑1 (MQ=255) atcccttCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCt < 1:15462682‑M1/61‑1 (MQ=255) ggTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCtt > 1:17884092/1‑68 (MQ=255) gtgtGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCttt > 1:19090265/1‑68 (MQ=255) tgtgCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCtttt > 1:2902472/1‑68 (MQ=255) tgtgCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCtttt > 1:28076724/1‑68 (MQ=255) tgtgCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCtttt > 1:16680916/1‑68 (MQ=255) tgtgCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCtttt > 1:20328052/1‑68 (MQ=255) gtgCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCttttt > 1:25068875/1‑68 (MQ=255) gtgCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCttttt > 1:12792196/1‑68 (MQ=255) CCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTg < 1:5904527‑M1/67‑1 (MQ=255) | AATAGAGCAAAAAGATAAGTATAGATGCTGGAGGAGGGGCGATTTTAAATGAGAGGAATCTGGTGTGCCTCCCTTTCGGGTGAAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTG > CP009273/840954‑841087 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |