| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2436000 = | 240 (0.680) | 13 (0.040) | 7/94 | NT | 5.9% | coding (758/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | 2436103 = | 217 (0.730) | coding (861/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 451 total aligned reads displayed.
AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGC > CP009273/2435934‑2436066 | ccctggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagcc < 1:18946720‑M1/2‑1 (MQ=255)ccctggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagcc < 1:24642905‑M1/2‑1 (MQ=255) gggCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGAGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:14099641‑M1/1‑67 (MQ=255) ggCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:11156107‑M1/1‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:1069306‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:18609919‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:17323036‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:7540360‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:18279385‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtacgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:7970335‑M1/64‑68 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:26321625‑M1/1‑67 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGCTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:11603234‑M1/1‑67 (MQ=255) ggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg < 1:4825589‑M1/5‑1 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:3886577‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:15605638‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:15721356‑M1/61‑67 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:24500079‑M1/60‑68 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt < 1:26904638‑M1/9‑1 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt < 1:16597842‑M1/9‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:4082298/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:9848202/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:2764267/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:15001088/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:23292075/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:24990592/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg > 1:8860557/1‑68 (MQ=255) ttgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGTgg > 1:7035158‑M1/58‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:1356410/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:21555688/1‑68 (MQ=255) gccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCgtgggt < 1:29020964‑M1/13‑3 (MQ=255) cgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGtt > 1:5055309/1‑68 (MQ=255) cgcAAACGGGAAATGCTATGCGGGGTGATGTAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGt < 1:11039058/67‑1 (MQ=255) aaTGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACgg > 1:5458596/1‑68 (MQ=255) aTGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACggg < 1:14719090/68‑1 (MQ=255) aTGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACggg < 1:7660622/68‑1 (MQ=255) aTGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACggg < 1:28532382/68‑1 (MQ=255) gCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgca > 1:24826810/1‑68 (MQ=255) gCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgca < 1:12499897/68‑1 (MQ=255) gCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgca > 1:10852297/1‑68 (MQ=255) cTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgca > 1:23397463/1‑67 (MQ=255) ggggTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCaa > 1:18807938/1‑68 (MQ=255) ggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCaa < 1:28088756‑M1/34‑1 (MQ=255) gggATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAAc < 1:9191023/65‑1 (MQ=255) ggAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGaa > 1:16795753/1‑67 (MQ=255) ggAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGaa > 1:8123606/1‑67 (MQ=255) ggAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGaa > 1:6718561/1‑67 (MQ=255) ggAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGaa > 1:20669206/1‑67 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGTAgcg > 1:25675517/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:24268430/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:19966824/1‑68 (MQ=255) cAGACATTACCGCTCCCCTGCTCCGCGCCGTaatagcgccggcgaccgcaacgcgcgggcaatacca > 1:27150173‑M1/1‑31 (MQ=255) aGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggcg > 1:28733400/1‑68 (MQ=255) aCATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAt > 1:4356468/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:10380971/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:26698584/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:29121668/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:12804905/1‑68 (MQ=255) aaagcgttacctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTa < 1:23648401‑M1/51‑1 (MQ=255) aCCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:22891615/1‑68 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:14548531/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:1697279/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:1371704/1‑67 (MQ=255) gttacctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc < 1:20398730‑M1/56‑1 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc < 1:15272577/68‑1 (MQ=255) gCTCCCCTGCTCCGCGCCGTaatagcgcccgcgccaaccccgcgctggcactaccaccgccgataatc > 1:7371071‑M1/1‑20 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGCTGCGGCGTGTATcggcg > 1:22588444/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:9574026/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:18006525/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:3598771/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:20278999/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:25933734/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGGTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTAgcggcg > 1:22340029/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACTGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt < 1:10018588/68‑1 (MQ=255) tCCCCTGCTCCGCGCCGGGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt > 1:2307375/1‑68 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:2198355/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:25358213/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGAAGCAAACGGGAAGCGGCGATTATCGGCggttg < 1:4480242/68‑3 (MQ=255) ccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtggt > 1:19276928/1‑68 (MQ=255) ccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtggt > 1:28376247/1‑68 (MQ=255) tGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAt > 1:6885034/1‑68 (MQ=255) gCTCCGCGCCGTaatagcgccagcgacaacaacgcgctggcaataccaccgccgataatcgccgctt > 1:26540935‑M1/1‑12 (MQ=255) gCTCCGCGCCGTaatagcgccagcgacaacaacgcgctggcaataccaccgccgataatcgccgctt > 1:24090958‑M1/1‑12 (MQ=255) gCTCCGCGCCGTaatagcgccagcgacaacaacgcgcgggcagtcccaccgccgttattcgccgctg > 1:25734159‑M1/1‑12 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:12293703/1‑68 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:3324272/1‑68 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:14223370/1‑68 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:6101647/1‑68 (MQ=255) tCCGCGCCGTaatagcgccagcgacaacaacgcgctggcaataccaccgccgataatcgccgcttccc > 1:25111860‑M1/1‑10 (MQ=255) tCCGCGCCGTaatagcgccagcgacaacaacgcgctggcaataccaccgccgataatcgccgcgtccc > 1:17636486‑M1/1‑10 (MQ=255) tCCGCGCCGTGGTTTAACCGCGCGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:6348242/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGTAAGCGGCGATTATCGGCGGTGGTATTg > 1:13017155/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:5579313/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:17709629/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:18157750/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:8651444/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:29231531/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:1192917/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:19594818/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:19778003/1‑67 (MQ=255) gCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg < 1:18454994‑M1/66‑1 (MQ=255) | AGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGC > CP009273/2435934‑2436066 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |