| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4061067 = | 357 (1.010) | 23 (0.080) | 8/94 | NT | 8.4% | coding (1570/2037 nt) | yihQ | alpha‑glucosidase |
| ? | CP009273 | 4061094 = | 205 (0.690) | coding (1543/2037 nt) | yihQ | alpha‑glucosidase | |||||
Only 100 of 473 total aligned reads displayed.
CAGTTGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGG > CP009273/4061000‑4061134 | ggcaatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAgc > 1:6907092‑M1/66‑68 (MQ=255) ggcaatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAgc > 1:514474‑M1/66‑68 (MQ=255) tGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAgc < 1:5742221/66‑1 (MQ=255) aatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAgcgc > 1:15554648‑M1/63‑67 (MQ=255) atgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAGCgcag > 1:8337077‑M1/62‑68 (MQ=255) tgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAGCgcagc > 1:22925102‑M1/61‑68 (MQ=255) gCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCgcagca < 1:16485207/68‑1 (MQ=255) ccAGGACGGTTACCTTCGTGGGTGCGCATCATAGGCGTGAAGGCGCTGAAATCGCACCAGCgcagca > 1:21862548/1‑67 (MQ=255) gACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCgcagcagca > 1:17460432/1‑66 (MQ=255) actgTTACCTTCTTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:23489191/64‑1 (MQ=255) aCGGTTTCCTTCGCGGGTGCGCATCATCGGCGTGAAGGCGCTGAATTCGCACCAGCGCtgcagctgc < 1:16884635/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:10080790/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:9298296/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:15296887/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:24557858/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc > 1:20986916/1‑67 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc > 1:14275716/1‑67 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:4348721/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:13424566/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc > 1:22327133/1‑67 (MQ=255) cGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGctc < 1:24852687/68‑1 (MQ=255) gTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:6411789/64‑1 (MQ=255) tACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCttt < 1:3145334/67‑1 (MQ=255) tACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCttt < 1:21235967/67‑1 (MQ=255) tACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCttt < 1:25242079/67‑1 (MQ=255) tACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCttt < 1:13275063/67‑1 (MQ=255) tACCTGCGTGCGGGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCttt < 1:18585828/67‑1 (MQ=255) cTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTtgct > 1:26977215/1‑67 (MQ=255) tCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTtgctgc > 1:26903822/1‑67 (MQ=255) tCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTtgctgc > 1:13895723/1‑67 (MQ=255) cGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTgcgc < 1:14030269/68‑1 (MQ=255) cGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTgcgc < 1:19862149/68‑1 (MQ=255) cGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCACACCAGCGCAGCAGCAGCTCTTTGCTgcgc < 1:10386936/68‑1 (MQ=255) gTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCt > 1:4975161/1‑68 (MQ=255) tGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTgcgat > 1:11510908/1‑65 (MQ=255) tGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCt > 1:12366207/1‑67 (MQ=255) tGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCt > 1:4781679/1‑67 (MQ=255) tGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCt > 1:6154039/1‑67 (MQ=255) gggTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTc > 1:7720063/1‑68 (MQ=255) gggTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTc > 1:28991410/1‑68 (MQ=255) gggTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCGTc > 1:12722101/1‑68 (MQ=255) ggTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCa > 1:8795257/1‑68 (MQ=255) ggTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCa > 1:21106682/1‑68 (MQ=255) ggTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCa > 1:22189730/1‑68 (MQ=255) agcgacattggcggttacaccaccctgtttgagatgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:5580101‑M1/31‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCATCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:8538458/67‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCa > 1:12053406/1‑66 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCa > 1:11395128/1‑66 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:11686340/67‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:7550077/67‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:7190257/67‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:16647081/67‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:414835/67‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:25846421/67‑1 (MQ=255) ggcgcAGCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:4456341/66‑1 (MQ=255) gcATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCa < 1:24735901/68‑1 (MQ=255) catcatCGGCGTGAAGGCGCTGAAATCGCACCAGCGCCGCAGCAGCTCTTTGCTGCGCTTCATCTCaa > 1:27357737/1‑68 (MQ=255) atcatcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCaa < 1:4088724/67‑1 (MQ=255) atcatcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCaa < 1:23256492/67‑1 (MQ=255) atcatcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCaa < 1:27771776/67‑1 (MQ=255) atcatcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCaa < 1:20072222/67‑1 (MQ=255) atcatcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCaa < 1:6577225/67‑1 (MQ=255) agcatcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCaa < 1:17114831/65‑1 (MQ=255) tcatcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAAc < 1:9002170/68‑1 (MQ=255) tcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAgg < 1:23759681/68‑1 (MQ=255) tcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAgg > 1:26357938/1‑68 (MQ=255) tcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAgg < 1:10832782/68‑1 (MQ=255) tcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAgg < 1:15842104/68‑1 (MQ=255) tcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAgg < 1:13311810/68‑1 (MQ=255) tcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAgg < 1:14863417/68‑1 (MQ=255) ggCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggt > 1:17876988/1‑68 (MQ=255) ggCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggt > 1:24014558/1‑68 (MQ=255) ggCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggt < 1:3317113/68‑1 (MQ=255) cGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtgg > 1:1910239/1‑68 (MQ=255) cGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtgg > 1:2392328/1‑68 (MQ=255) cGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtgg > 1:14570798/1‑68 (MQ=255) cGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtg < 1:24458921/67‑1 (MQ=255) gTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtggt < 1:2439314/68‑1 (MQ=255) gTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtggt < 1:12919404/68‑1 (MQ=255) gTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtggt < 1:26136628/68‑1 (MQ=255) gAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGgtgt < 1:24176268/68‑1 (MQ=255) gAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGgtgt < 1:19475753/68‑1 (MQ=255) accaccctgtttgagatgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTa < 1:14682581‑M1/49‑1 (MQ=255) aGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTaa < 1:15979144/68‑1 (MQ=255) ggCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGATTCATCTCAAACAGGGTGGTGTaa > 1:9536274/1‑67 (MQ=255) gcTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCg < 1:18811032/67‑1 (MQ=255) gcTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCg < 1:22694468/67‑1 (MQ=255) gcTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGc < 1:12523854/68‑1 (MQ=255) cctgtttgagatgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCg < 1:28385784‑M1/53‑1 (MQ=255) cctgtttgagatgaAGCGCAGCAGCAGCGCTTTGCTGCGCTTCATCGCATACAGGGGGGTGTAACCg < 1:8036375‑M1/53‑1 (MQ=255) ttgagatgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATg < 1:18000386‑M1/59‑1 (MQ=255) ttgagatgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATg < 1:25310517‑M1/59‑1 (MQ=255) aTCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATg > 1:25042742/1‑67 (MQ=255) tCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTc < 1:20544766/68‑1 (MQ=255) atgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTc < 1:28658481‑M1/61‑1 (MQ=255) aCCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCt < 1:17774513/67‑1 (MQ=255) ccAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCtgt > 1:20654231/1‑68 (MQ=255) ccAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCtgt > 1:3740200/1‑68 (MQ=255) ccAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCtgt < 1:28104911/68‑1 (MQ=255) AGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTgtgg < 1:27133427‑M1/68‑1 (MQ=255) | CAGTTGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGG > CP009273/4061000‑4061134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |