| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4512275 = | 279 (0.790) | 18 (0.060) | 8/92 | NT | 6.6% | coding (1637/1968 nt) | yjhG | putative dehydratase |
| ? | CP009273 | 4512318 = | 281 (0.970) | coding (1594/1968 nt) | yjhG | putative dehydratase | |||||
Only 100 of 481 total aligned reads displayed.
TTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTA > CP009273/4512208‑4512342 | ttCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGc < 1:7423598/68‑1 (MQ=255)ttCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGc < 1:29168172/68‑1 (MQ=255)ttCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGc < 1:1965886/68‑1 (MQ=255)ttCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGc < 1:24996440/68‑1 (MQ=255)ttCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGc < 1:24111790/68‑1 (MQ=255) aagaaacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcacc < 1:6287700‑M1/2‑1 (MQ=255) aagaaacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcacc < 1:14242282‑M1/2‑1 (MQ=255) agaaacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCg < 1:18310542‑M1/3‑1 (MQ=255) gaaacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGa < 1:6138898‑M1/4‑1 (MQ=255) aTTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGAt < 1:12311119/68‑1 (MQ=255) aacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgctaatcaCCGa > 1:6923503‑M1/63‑66 (MQ=255) aacctaccaggttaccagtgccctgaagcatctgtcaaacgctaagcatgtttcgttaatcaCCGAt > 1:24591953‑M1/63‑67 (MQ=255) tAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGc < 1:19502580/68‑1 (MQ=255) acctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATg < 1:24152710‑M1/6‑1 (MQ=255) acctaccaggttaccagtgccctgaagcatctgtcaaacggtaagcaggtttcgttaatcaCCGATGc < 1:2781677‑M1/7‑1 (MQ=255) cctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGc < 1:17000124‑M1/7‑1 (MQ=255) cctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGc < 1:5900173‑M1/7‑1 (MQ=255) cctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGCa > 1:3134463‑M1/61‑68 (MQ=255) aTCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAc > 1:5119383/1‑67 (MQ=255) aTCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAc > 1:10619104/1‑67 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 1:21038719/68‑1 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 1:1913335/68‑1 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 1:17200114/68‑1 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 1:4078717/68‑1 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 1:14005533/68‑1 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 1:15066495/68‑1 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgc > 1:3915182/1‑67 (MQ=255) ccccGGGGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 1:9009076/68‑1 (MQ=255) ccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGcc < 1:25280076/68‑1 (MQ=255) ccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGcc < 1:17783856/68‑1 (MQ=255) ccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGcc < 1:19311078/68‑1 (MQ=255) cGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCa < 1:12550455/68‑1 (MQ=255) cGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCa < 1:12821197/68‑1 (MQ=255) ggTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAg > 1:13527669/1‑68 (MQ=255) gTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGaa > 1:20081003/1‑68 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAAc > 1:18549983/1‑67 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAAc > 1:15597058/1‑67 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAAc > 1:23663155/1‑67 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAAc > 1:4961364/1‑67 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACg < 1:20401116/68‑1 (MQ=255) aTTTACCGATGCGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAAc > 1:26983148/1‑67 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGcc < 1:16398452/68‑1 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGcc < 1:21407968/68‑1 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGcc < 1:3595483/68‑1 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGc > 1:2394405/1‑67 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGc > 1:13013901/1‑67 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGc > 1:18010151/1‑67 (MQ=255) tACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGccc > 1:21878443/1‑68 (MQ=255) ccGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCga > 1:7802210/1‑68 (MQ=255) ccGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCga > 1:10049524/1‑68 (MQ=255) gATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCCCGCGCCAGTAGAAACGCCCgaga > 1:26205191/1‑68 (MQ=255) gATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCgaga > 1:9595163/1‑68 (MQ=255) gATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCgaga > 1:8620296/1‑68 (MQ=255) agcatctgtcatacggtaagcatgtttcgttaatcaCCGCTGCACGCGCCAGTAGAAACGCCCGAGaa < 1:17457359‑M1/32‑1 (MQ=255) ggggCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAAc > 1:5390266/1‑68 (MQ=255) ggggCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAAc > 1:1323225/1‑68 (MQ=255) gCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGt < 1:1077724/67‑1 (MQ=255) gCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGt < 1:16195318/67‑1 (MQ=255) tgtcatacggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGc < 1:22803660‑M1/38‑1 (MQ=255) ccTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTg < 1:2264119/67‑1 (MQ=255) ccTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGc > 1:23142608/1‑68 (MQ=255) ccTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGc > 1:11958699/1‑68 (MQ=255) cTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCa > 1:10369385/1‑68 (MQ=255) ccGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATc < 1:16856270/68‑1 (MQ=255) ccGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATc < 1:20863779/68‑1 (MQ=255) ggCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCgg < 1:11325126/68‑1 (MQ=255) ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGt < 1:4294487/67‑1 (MQ=255) ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGt < 1:17689988/67‑1 (MQ=255) ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTg > 1:20565763/1‑68 (MQ=255) ggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGTAGAAACGCCCGAGGACCGTGCATCGGTGa < 1:18898960‑M1/46‑1 (MQ=255) ggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGa < 1:21663830‑M1/46‑1 (MQ=255) ggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGGAGAAACGCCCGAGAAACGTGCATCGGTGa < 1:13805220‑M1/46‑1 (MQ=255) cAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTg < 1:8664630/67‑1 (MQ=255) cAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGa < 1:6607636/68‑1 (MQ=255) gcTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGAtt < 1:27145501/66‑1 (MQ=255) gcTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTa > 1:4687940/1‑67 (MQ=255) tCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGa < 1:7635186/68‑1 (MQ=255) tCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGa < 1:22366593/68‑1 (MQ=255) cTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGaa < 1:8407050/68‑1 (MQ=255) tGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGaaa < 1:9205401/68‑1 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACa < 1:15388832/67‑1 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACa < 1:3245378/67‑1 (MQ=255) cccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACAt < 1:28735329/67‑1 (MQ=255) caTGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCtt > 1:28988911/1‑67 (MQ=255) caTGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCtt > 1:19907813/1‑67 (MQ=255) tcgCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:15895382/66‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:18139404/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:11521864/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:14509385/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:14781754/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:8188165/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:6807014/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:22190851/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:23389552/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:26754105/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:27388299/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:28432795/68‑1 (MQ=255) gCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGt > 1:9857264/1‑68 (MQ=255) CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGt > 1:25799617‑M1/1‑67 (MQ=255) CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGt > 1:11061218‑M1/1‑67 (MQ=255) | TTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTA > CP009273/4512208‑4512342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |