| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 66560 = | 269 (0.760) | 1244 (5.800) +CGTTTTTTTGGATGGAGGAATT |
47/68 | NT | 85.9% | intergenic (‑28/‑314) | araD/araC | pseudogene, truncated/ara regulon transcriptional activator; autorepressor |
| ? | CP009273 | = 3509273 | 404 (1.140) | intergenic (‑1/+106) | dam/damX | DNA adenine methyltransferase/cell division protein that binds to the septal ring | |||||
Only 100 of 2675 total aligned reads displayed.
TGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATGGATAAA > CP009273/66493‑66627 | gtgtTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAgg < 1:27340220/68‑1 (MQ=255) acttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacggg > 1:28131965‑M1/67‑68 (MQ=255) acttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacggg > 1:4395540‑M1/67‑68 (MQ=255) cttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGt < 1:7708161‑M1/3‑1 (MQ=255) cttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGt < 1:14446436‑M1/3‑1 (MQ=255) cttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGt < 1:6113829‑M1/3‑1 (MQ=255) cttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGt < 1:12423502‑M1/3‑1 (MQ=255) cttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGt < 1:23507488‑M1/3‑1 (MQ=255) cttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGt < 1:26677594‑M1/3‑1 (MQ=255) cttgccccctgcccacttcaaaaaagcgcaatttttcttcatgaattcctccatccaaaaaaacgGGt < 1:4174736‑M1/3‑1 (MQ=255) ttgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTa > 1:13958169‑M1/65‑68 (MQ=255) tgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTAt < 1:18693437‑M1/5‑1 (MQ=255) tgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTAt < 1:8911844‑M1/5‑1 (MQ=255) tgccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTAt < 1:6870328‑M1/5‑1 (MQ=255) gccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATg > 1:26146188‑M1/63‑68 (MQ=255) gccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATg > 1:11542503‑M1/63‑68 (MQ=255) gccccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATg < 1:17885495‑M1/6‑1 (MQ=255) ccccctgccaacttcaaaaaagcgcgatttttcttcaagaattcctccatccaaaaaaacgGGTATgg < 1:18935034‑M1/7‑1 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga < 1:586525‑M1/8‑1 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga < 1:23775094‑M1/8‑1 (MQ=255) cccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGga > 1:25191495‑M1/61‑68 (MQ=255) ggCAGCGCCAGGTTGGCTTCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGgag > 1:25872189/1‑68 (MQ=255) ccctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGgag > 1:14701651‑M1/60‑68 (MQ=255) cctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGgaga < 1:26348662‑M1/10‑1 (MQ=255) cctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGgaga < 1:8615869‑M1/10‑1 (MQ=255) ctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGaa > 1:17640728‑M1/58‑68 (MQ=255) ctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGaa > 1:480161‑M1/58‑68 (MQ=255) ctgcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGaa > 1:13429899‑M1/58‑68 (MQ=255) gcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAAc > 1:27617551‑M1/56‑68 (MQ=255) gcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAAc < 1:27892251‑M1/13‑1 (MQ=255) gcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAAc > 1:20864530‑M1/56‑68 (MQ=255) gcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAAc > 1:6383863‑M1/56‑68 (MQ=255) gcccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAAc > 1:13152132‑M1/56‑68 (MQ=255) cccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa < 1:20400408‑M1/14‑1 (MQ=255) cccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa < 1:19846355‑M1/14‑1 (MQ=255) gcCAGGTTGGCTTCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAAc < 1:16820566/66‑1 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa > 1:1001816‑M1/54‑67 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa > 1:4568079‑M1/54‑67 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACa > 1:16584585‑M1/54‑67 (MQ=255) ccacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAg < 1:12882723‑M1/15‑1 (MQ=255) cacttcaaaaaagcgcgatttttcttcattaattcctccatccaaaaaaacgGGTATGGAGAAACAGt > 1:11924351‑M1/53‑68 (MQ=255) cacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGt > 1:3508053‑M1/53‑68 (MQ=255) cacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGt > 1:15518923‑M1/53‑68 (MQ=255) cacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGt > 1:28739244‑M1/53‑68 (MQ=255) cacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGt > 1:14168956‑M1/53‑68 (MQ=255) cacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGt > 1:10608712‑M1/53‑68 (MQ=255) cacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGt > 1:23281918‑M1/53‑68 (MQ=255) cacttcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGt > 1:3231062‑M1/53‑68 (MQ=255) tcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTagag < 1:20153025‑M1/20‑1 (MQ=255) tcaaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTagag < 1:9162706‑M1/20‑1 (MQ=255) caaaaaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTagaga > 1:22058510‑M1/48‑68 (MQ=255) tGGCTTCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAACAGTagaga < 1:12131372/67‑1 (MQ=255) aaagcgcgatttttcttcatgagttcctccagccaaaaaaacgGGTATGGAGGAACAGTAGAGAGtt < 1:5093497‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:26954907‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:3024920‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:21783337‑M1/24‑1 (MQ=255) aaagcgcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGtt < 1:28347923‑M1/24‑1 (MQ=255) ttCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGc > 1:9687464/1‑68 (MQ=255) ttCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGc < 1:8080397/68‑1 (MQ=255) gcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGa > 1:25468351‑M1/39‑66 (MQ=255) gcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGa > 1:19264129‑M1/39‑66 (MQ=255) gcgatttttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGAt > 1:17066741‑M1/39‑67 (MQ=255) tttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGc > 1:3923690‑M1/33‑68 (MQ=255) tttcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGc > 1:372610‑M1/33‑68 (MQ=255) tcttcatgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGt > 1:11226177‑M1/31‑68 (MQ=255) ttcatgatttcctccatcgttaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAATGCGTCa > 1:8342124‑M1/29‑68 (MQ=255) ccGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAgg < 1:11736001/68‑1 (MQ=255) catgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAgg > 1:16042433‑M1/27‑68 (MQ=255) catgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAgg > 1:7407975‑M1/27‑68 (MQ=255) catgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAgg > 1:1839024‑M1/27‑68 (MQ=255) catgaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAgg > 1:22777001‑M1/27‑68 (MQ=255) gaattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAg > 1:719336‑M1/24‑68 (MQ=255) aattcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAgg < 1:15766488‑M1/46‑1 (MQ=255) attcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAgg > 1:5581340‑M1/22‑67 (MQ=255) attcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAgg > 1:6666579‑M1/22‑67 (MQ=255) attcctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGa < 1:108453‑M1/47‑1 (MQ=255) cccGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGa > 1:24434188/1‑67 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc > 1:23052602‑M1/19‑68 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc > 1:29021667‑M1/19‑68 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc > 1:18135021‑M1/19‑68 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc > 1:24684003‑M1/19‑68 (MQ=255) cctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc > 1:20610113‑M1/19‑68 (MQ=255) cGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc < 1:103711/68‑1 (MQ=255) cGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc < 1:24149411/68‑1 (MQ=255) ctccatccaaaaaaacgGGTATGGAGAAACTGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCg > 1:1739926‑M1/18‑68 (MQ=255) ctccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCg > 1:5293261‑M1/18‑68 (MQ=255) tccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATcc < 1:13766837‑M1/50‑1 (MQ=255) ccatccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCt > 1:2145380‑M1/16‑68 (MQ=255) cgcgTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTa > 1:9436700/1‑68 (MQ=255) gcgTGGACCTGCAGGTATGGTGAACCAGTTGCGAGTGGGGATATATAGCGTCAGGTAGGATCCGCTaa < 1:15337131/68‑1 (MQ=255) atccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTaa > 1:21241814‑M1/14‑68 (MQ=255) ccaaaaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTaa < 1:16293645‑M1/55‑1 (MQ=255) caaaaaaacgGGTATTGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCt > 1:24913371‑M1/11‑68 (MQ=255) aaaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTAt < 1:27168725‑M1/61‑1 (MQ=255) aaaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATg < 1:22497717‑M1/62‑1 (MQ=255) cTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATgg > 1:12625605/1‑68 (MQ=255) aaacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATgg > 1:22297707‑M1/6‑68 (MQ=255) aacgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATGGa > 1:19547467‑M1/5‑68 (MQ=255) acgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATGGAt < 1:15009527‑M1/65‑1 (MQ=255) cgGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATGGATa > 1:21046250‑M1/3‑68 (MQ=255) | TGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCCGGCGCCCGAGACCCGCACGCGTCGACCTGCAGGTATGGAGAAACAGTAGAGAGTTGCGATAAAAAGCGTCAGGTAGGATCCGCTAATCTTATGGATAAA > CP009273/66493‑66627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |