New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 3509341 =536 (1.520)30 (0.100) 7/94 NT 7.4% intergenic (‑69/+38) dam/damX DNA adenine methyltransferase/cell division protein that binds to the septal ring
?CP009273 3509369 = 302 (1.020)intergenic (‑97/+10) dam/damX DNA adenine methyltransferase/cell division protein that binds to the septal ring

Only 100 of 532 total aligned reads displayed.

TGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTGGCCTGG  >  CP009273/3509302‑3509436
                                                                   |                                                                   
     caggtacaggccgatctgaagtaatcaaggttatctcccgcaatggtttatcgttgcgggagATAAc                                                                 <  1:9686563‑M2/5‑1 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATaa                                                                  >  1:12519701/1‑66 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:21479302/67‑1 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:17734248/67‑1 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:1633325/67‑1 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:14360268/67‑1 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:8958446/67‑1 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:13903944/67‑1 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:12950115/67‑1 (MQ=255)
      gaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAcc                                                                <  1:18243413/67‑1 (MQ=255)
        aaGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCt                                                               <  1:20517300/66‑1 (MQ=255)
        aaGCTCCGACAGCATCCAGCGCGTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTg                                                             >  1:5094648/1‑68 (MQ=255)
         aGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGa                                                            <  1:9265412/68‑1 (MQ=255)
          gCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGAt                                                           >  1:10586598/1‑68 (MQ=255)
          acaggccgatctgaagtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGAt                                                           <  1:13803660‑M1/39‑1 (MQ=255)
             ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                                                        <  1:10015315/68‑1 (MQ=255)
             ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                                                        <  1:14053346/68‑1 (MQ=255)
             ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                                                        <  1:17386017/68‑1 (MQ=255)
             ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                                                        <  1:22371924/68‑1 (MQ=255)
              gccgatctgaagtaatcaaggttatCTCCCGCAGCGATACGCCATTGCGGGAGATAGCCTTGATTACt                                                       <  1:8444768‑M1/43‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:299402/68‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:985373/68‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:25029896/68‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:8801529/68‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:11597745/68‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:803369/68‑1 (MQ=255)
               ccgatctgaagtaatcaaggttatctcccgcaatggtttatcgttgcgggagATAACCTTGATTAc                                                        <  1:6459954‑M2/14‑1 (MQ=255)
               ccgatctgaagtaatcaaggttatctcccgcaatggtttatcgttgcgggagATAACCTTGATTAc                                                        <  1:12335171‑M2/14‑1 (MQ=255)
                       ccAGCTCTTCAGGCAACTCCCGCAACTATAAACCATTGCGTGAGATAACCTTGATTACTTCAGATCgg                                              <  1:4246315/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCTACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:27226952/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:24224805/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:7722856/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:10164325/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:13705051/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:11169362/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:18613819/68‑1 (MQ=255)
                        cAGCGCTTCATGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:4573218/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:26878251/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:15661402/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:25586350/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:8389538/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:7484427/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:27717881/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:23972547/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:23346682/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:22769410/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:12602777/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:19220951/68‑1 (MQ=255)
                        cAGCGATTCAGGCAACTCCCGCAACTATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:22022960/68‑1 (MQ=255)
                        agtaatcaaggttatctcccgcaatggtttatcgttgcgggagATAACCTTGATTACTTCAGATCGGc                                             <  1:13017196‑M2/25‑1 (MQ=255)
                        agtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:14251645‑M1/52‑1 (MQ=255)
                        agtaaacaaggtaatctcccgcaatggttaatcgttgcgggagATAACCTTGATTACTTCAGATCGGc                                             <  1:3485682‑M2/25‑1 (MQ=255)
                         gtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:21718551‑M1/52‑1 (MQ=255)
                          gcgcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATACCCTTGATTACTTCAGATCgg                                              >  1:1489949/1‑65 (MQ=255)
                          gcgcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              >  1:18469887/1‑65 (MQ=255)
                          gcgcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              >  1:27049002/1‑65 (MQ=255)
                          gcgcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACCTCAGATCgg                                              >  1:23194489/1‑65 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:5327520/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         >  1:6747545/1‑68 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         >  1:15586253/1‑68 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:3723133/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:4899072/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         >  1:15017273/1‑68 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:18928081/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:26186891/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:23544645/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         >  1:21278440/1‑68 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:11999073/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         >  1:20026581/1‑68 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:19658404/68‑1 (MQ=255)
                            atcaaggttatctcccgcaatggtttatcgttgcgggagATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:19580846‑M2/29‑1 (MQ=255)
                              ttCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTa                                        <  1:11044099/67‑1 (MQ=255)
                                    cAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc                                  >  1:13502499/1‑67 (MQ=255)
                                    cAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc                                  >  1:1593590/1‑67 (MQ=255)
                                    cAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc                                  >  1:21036452/1‑67 (MQ=255)
                                      aCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCa                               <  1:24489638/68‑1 (MQ=255)
                                           CGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGt                          >  1:16902691‑M1/1‑68 (MQ=255)
                                           CGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGt                          >  1:21806047‑M1/1‑68 (MQ=255)
                                           CGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGt                          >  1:5885374‑M1/1‑68 (MQ=255)
                                              AACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTc                       <  1:27417943‑M1/68‑1 (MQ=255)
                                              AACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTc                       <  1:2089559‑M1/68‑1 (MQ=255)
                                              AACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTc                       <  1:29059908‑M1/68‑1 (MQ=255)
                                                cGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCg                      >  1:27624302/1‑67 (MQ=255)
                                                      aCCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACgg               >  1:3360786/1‑68 (MQ=255)
                                                      aCCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACgg               >  1:19531215/1‑68 (MQ=255)
                                                      aCCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACgg               >  1:26526054/1‑68 (MQ=255)
                                                       ccATTGCGGGAGATAACCTTGCTTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACggg              >  1:3988394/1‑68 (MQ=255)
                                                       ccATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACggg              >  1:5424279/1‑68 (MQ=255)
                                                       ccATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACggg              >  1:26005968/1‑68 (MQ=255)
                                                        cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGt             <  1:28412857/68‑1 (MQ=255)
                                                        cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGt             >  1:17172007/1‑68 (MQ=255)
                                                         aTTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGtt            >  1:9571812/1‑68 (MQ=255)
                                                         aTTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGtt            <  1:19068512/68‑1 (MQ=255)
                                                         aTTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGtt            <  1:10321219/68‑1 (MQ=255)
                                                           tgcgggagATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGtttt          >  1:3193016‑M2/9‑68 (MQ=255)
                                                             cgggagATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTg        >  1:25145230‑M2/7‑68 (MQ=255)
                                                                gagATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTGGc      <  1:280092‑M2/64‑1 (MQ=255)
                                                                gagATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTGGc      <  1:18099630‑M2/64‑1 (MQ=255)
                                                                 agATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTgg       >  1:7123255‑M2/3‑65 (MQ=255)
                                                                  gATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTGGCCt    <  1:6963563‑M2/66‑1 (MQ=255)
                                                                   |                                                                   
TGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTGGCCTGG  >  CP009273/3509302‑3509436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.