| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3630213 | 272 (0.770) | 30 (0.110) | 15/84 | NT | 13.1% | coding (558/1203 nt) | yhiN | putative oxidoreductase |
| ? | CP009273 | = 3630199 | 195 (0.740) | coding (572/1203 nt) | yhiN | putative oxidoreductase | |||||
Only 100 of 357 total aligned reads displayed.
AGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCG > CP009273/3630132‑3630262 | aGGCACCGCCACGCCCGCCAGCACCTGTATCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:17693387/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:9983386/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:25368070/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:12846653/1‑68 (MQ=255) gCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAg < 1:9027033‑M2/67‑2 (MQ=255) gCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAg < 1:11293298‑M2/67‑2 (MQ=255) ccGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgaccc < 1:27596942‑M2/68‑6 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGC < 1:25624132‑M1/68‑1 (MQ=255) cACGCCCGCCAGCACCTGTAACTCTTCGCGCAACGGTTTATGCCGCGTGAATGGCCCCAGACCCGCGC > 1:13261910‑M1/1‑68 (MQ=255) cACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgc < 1:5999342‑M2/68‑10 (MQ=255) cACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGC > 1:13691144‑M1/1‑68 (MQ=255) aCGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcg > 1:18040500‑M2/1‑58 (MQ=255) gcccgccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcggg < 1:17477979‑M2/68‑13 (MQ=255) gcccgccACCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGG < 1:142927‑M1/68‑1 (MQ=255) cccgccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcggg < 1:23586526‑M2/67‑13 (MQ=255) ccgccAGCACCTGTAACTCTTCTAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtc < 1:28479392‑M2/68‑15 (MQ=255) ccgccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggt > 1:27436298‑M2/1‑54 (MQ=255) ccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGgc > 1:12743803/1‑68 (MQ=255) cAGCACCTGTAACTCTTCTAGCACCGTTTTATGCCGCGTTAATGGCACCAGACCCGCGCGGGTCgggt < 1:2424728/68‑3 (MQ=255) cAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggt < 1:18625480‑M1/68‑5 (MQ=255) cAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggt < 1:3992718‑M1/68‑5 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCATAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca < 1:11587492‑M1/68‑9 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca > 1:3853362‑M1/1‑60 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca < 1:14961428‑M1/68‑9 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca < 1:22859292‑M1/68‑9 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGGGAATGGCACCAgacccgcgcgggtctggtgcca > 1:24909834‑M2/1‑46 (MQ=255) aCCTGTAACTCTTCGACCACCGGTTTATGCAGAGTGAATGGCACCAgccccgcgcgggtctggtgcca > 1:8397207‑M2/1‑46 (MQ=255) aCCTGAAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca < 1:4621422‑M1/68‑9 (MQ=255) ccggTAACTCTTCGAGCACCGGTATATCCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACg < 1:3134645/65‑1 (MQ=255) tGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGtt > 1:12291609/1‑68 (MQ=255) tAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGa > 1:27802175/1‑68 (MQ=255) tAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGa > 1:18785389/1‑68 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccattcac > 1:12441661‑M2/1‑40 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTg > 1:2797537/1‑66 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:10305877/1‑68 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:11445277/1‑67 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAAAGGCACCAGACCCGAGCCGGTCGGCAGCACGTTGAg > 1:23278075/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCCGACCCGCGCGGGTCtggtgccattccc > 1:21110527‑M1/1‑52 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtgtgccattcactct > 1:2005855‑M1/1‑52 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:18669442/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:15924865/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:14676769/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:22256314/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:4787865/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:109614/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGc < 1:26846956/68‑1 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:29114513/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:27151557/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:24199966/1‑68 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccattcactctgca > 1:10437933‑M2/1‑35 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:27086961/1‑68 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTGGAGGCCaa > 1:5379878/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:6842043/1‑68 (MQ=255) cAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:10569817/1‑67 (MQ=255) cAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:8809811/1‑67 (MQ=255) tATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATc < 1:25165214/68‑1 (MQ=255) tATGCAGACTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATc < 1:8150072/68‑1 (MQ=255) aTGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt < 1:439676/68‑1 (MQ=255) aTGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt < 1:15492211/68‑1 (MQ=255) aTGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt < 1:18402307/68‑1 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:5777458/1‑68 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:26433119/1‑68 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCC‑AATTGTTCGGCAATCTta > 1:13923713/1‑68 (MQ=255) tcAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:17049905/2‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:11625274/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:10108416/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:9478221/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:19866788/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:21670194/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:24724666/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:22972648/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:5609093/1‑68 (MQ=255) agagTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaaga < 1:14209531‑M1/67‑38 (MQ=255) agTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATaa > 1:7140509/1‑67 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagag < 1:6911419‑M1/65‑39 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:16369745/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:19484849/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:20232087/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:28705888/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:7741238/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:21919090/1‑68 (MQ=255) tGAATGGCACCAgacccgcgcgggtctggtggcattcacgctgcataaaccgttgctggaagagttac < 1:2134823‑M2/68‑57 (MQ=255) tGGCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaagagttacaggt < 1:20558409‑M2/68‑61 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:16196361/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:16650405/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:24051500/1‑68 (MQ=255) tGGCACCACACCCGCGCGGGTCCGCAGCACGTTGAGGCCAATTTGTTCGGCAATCTTATAACCAAACg > 1:16713449/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:22642183/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:13400552/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:2571931/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCGTATAACCAAACGGc > 1:14050290/1‑68 (MQ=255) aCCAGACCCGCGCGGGTCGGCCGCACGTTGAGGCCAAATTGTTCGGCAATCTTATACCCAAACGGCg > 1:25064875/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGCGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:6702483/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:26046603/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:20798268/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:3593518/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:28091179/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:1509400/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:9684306/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:239713/1‑67 (MQ=255) | AGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCG > CP009273/3630132‑3630262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |