| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4161825 = | NA (NA) | 13 (0.040) | 6/96 | NT | 100% | intergenic (+141/‑160) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | CP009273 | 4161830 = | 0 (0.000) | intergenic (+146/‑155) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding | |||||
Only 100 of 144 total aligned reads displayed.
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTT > CP009273/4161764‑4161897 | aaacggccatccggcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:20657928‑M2/2‑1 (MQ=255)aaaaggccatccgtctggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:1374611‑M2/2‑1 (MQ=255)aaaaggccatccgtctggatggccttctgcttaattcgatgcctgccagtttatggcgggcgtcctGc < 1:5097800‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggtgggcgtcctGc < 1:10908940‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctg > 1:11707928‑M2/67‑67 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctg > 1:24141644‑M2/67‑67 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:24947120‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:15676743‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:17508908‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:1822909‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:20282694‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:21747551‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:23344589‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:23694038‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:10031310‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:26563177‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:3597854‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:4009260‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:4179873‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:4505177‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:8307284‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:9327035‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:1036308‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:11888169‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:13060265‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:13751540‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:1194754‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttaaggcgggcgtcctg > 1:6957059‑M2/67‑67 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgccgggcaggttatggcgggcgtcctGc < 1:22059374‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttcatgcctggcagtttatggcgggcgtcctGc < 1:23775966‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaaattgatgcctggcagtttatggcgggcgtcctGc < 1:12800860‑M2/2‑1 (MQ=255)aaaaggccatccggcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:9519737‑M2/2‑1 (MQ=255)aaaaggccatccgccaggatggccttctgctaactttgatgcctggcagtttatggcgggcgtcctGc < 1:7170074‑M2/2‑1 (MQ=255)aaaagcccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:2205639‑M2/2‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:14818060‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:8446828‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:14095561‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:11313029‑M2/3‑1 (MQ=255) tccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATaa < 1:18542672‑M2/11‑1 (MQ=255) tccgtcaggatggccgtctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATaa < 1:24927888‑M2/11‑1 (MQ=255) tggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGc < 1:4747340‑M2/21‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:23717382‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:3291233‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:15087282‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:21151293‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:15053754‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttagggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:9184285‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtatatggcgggcgtcccGCCCGCCATAAACTGCCAGGCATCaa < 1:4500057‑M2/26‑1 (MQ=255) aCGCCCGCGATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:24711357/1‑68 (MQ=18) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGCCGGATGGGCTTTTTGCGt > 1:1998932/1‑68 (MQ=255) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg < 1:26559840/67‑1 (MQ=31) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg < 1:8637884/67‑1 (MQ=31) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:7760250/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:2545921/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:28776361/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:11950059/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:4456422/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:6780891/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:6547550/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:633246/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:5551856/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:4233491/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:16567493/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:18981076/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:24187608/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:24443084/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:1713201/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:254221/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCGTTTTGCGt > 1:9009117/1‑68 (MQ=18) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACAGATGGCCTTTTTGCGt > 1:14135900/1‑68 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCATAAGGCAATACTGACTGATGGCCTTTTTGCGtt > 1:10101726/1‑68 (MQ=11) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGCTGGCCTTTTTGCGtt > 1:1325668/1‑68 (MQ=25) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:771718/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:1483196/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:8125509/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:7405612/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg < 1:16744845/68‑2 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:17568496/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:18602585/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:15399388/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:25708315/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:13940226/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:3174270/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:25130342/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:20629269/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCAGCAAATTAAGCAGAAGGCCTTCCTCACGGATGGCCTTTTTGCGtt > 1:27953094/1‑68 (MQ=11) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:17115588‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:25541892‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:10012335‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:26119488‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:26166660‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:16794472‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:1227492‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:2756391‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:8052986‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:22434081‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:21903532‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:1894584‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:21163765‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:21091006‑M2/68‑3 (MQ=255) | GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTT > CP009273/4161764‑4161897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |