| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 138464 = | NA (NA) | 6 (0.020) | 5/94 | NT | NA | intergenic (+10/+31) | hpt/can | hypoxanthine phosphoribosyltransferase/carbonic anhydrase |
| ? | CP009273 | 138487 = | NA (NA) | intergenic (+33/+8) | hpt/can | hypoxanthine phosphoribosyltransferase/carbonic anhydrase | |||||
Only 100 of 700 total aligned reads displayed.
CGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAA > CP009273/138397‑138531 | agcaacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccat < 1:6075944‑M1/1‑1 (MQ=255) gcaacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccat < 1:34484936‑M1/1‑1 (MQ=255) gcaacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccat < 1:15582571‑M1/1‑1 (MQ=255) gcaacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccat < 1:4383702‑M1/1‑1 (MQ=255) gcaacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccat < 1:12715271‑M1/1‑1 (MQ=255) gcaacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccat < 1:19491261‑M1/1‑1 (MQ=255) gCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGTTGGACGAGTAAGTGTGAAGtt > 1:22394739/1‑67 (MQ=255) gCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGtt > 1:2580103/1‑67 (MQ=255) gCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGtt > 1:31878486/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:20261607/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:22633151/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:5837842/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:1393776/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:7468393/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:12140265/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:11489482/1‑67 (MQ=255) acaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGcc > 1:26839956/1‑68 (MQ=255) acaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGcc > 1:7665096/1‑68 (MQ=255) acaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGcc > 1:24080831/1‑68 (MQ=255) aacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccatg > 1:670759‑M1/65‑66 (MQ=255) cgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCgg > 1:2097778‑M1/63‑68 (MQ=255) cgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCgg > 1:22000550‑M1/63‑68 (MQ=255) aGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCgg > 1:15395664/1‑68 (MQ=255) gttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCGGa < 1:9239424‑M1/7‑1 (MQ=255) gttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCGGa < 1:328750‑M1/7‑1 (MQ=255) taccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCGGAt > 1:30714109‑M1/60‑67 (MQ=255) taccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCGGAt > 1:29990470‑M1/60‑67 (MQ=255) taccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCGGAt > 1:20428072‑M1/60‑67 (MQ=255) gTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCg < 1:312564/64‑1 (MQ=255) gTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGa < 1:28320314/66‑1 (MQ=255) gTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGa < 1:3858213/66‑1 (MQ=255) gTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGa < 1:14717825/66‑1 (MQ=255) gTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGAtg < 1:17554890/68‑1 (MQ=255) gTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGAtg > 1:23334532/1‑68 (MQ=255) tACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGAtgt < 1:25012327/67‑1 (MQ=255) aCCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATgtgt < 1:33290201/68‑1 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:29297309/1‑67 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:17265145/1‑67 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:33913652/1‑67 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCGTGACGAGTAATTGTGAAGTTGCCGGATGTGtt > 1:4946933/1‑67 (MQ=255) gTCATCTGCCGTATATCGGCAAAGGGATTCTGCTGGACGAGTAAGTGTGAAGTAGCCGGATGTGTTGc < 1:19893724/68‑1 (MQ=255) cATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCa < 1:30603939/67‑1 (MQ=255) cATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCa > 1:11136249/1‑67 (MQ=255) cATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCAt < 1:13513194/68‑1 (MQ=255) gCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggc > 1:28899047/1‑68 (MQ=255) ccGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggca > 1:24470821/1‑68 (MQ=255) cGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggca < 1:21242422/67‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGCGTAAGTGTGAAGTTGCCGGATGTGTTGGATCCggcatggc > 1:16128360/1‑68 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc < 1:7912566/68‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc < 1:10490288/68‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc < 1:24771346/68‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAACGTGCCGGATGTGTTGCATCCggcatggc < 1:29637187/68‑1 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTTCATACggcatggcat > 1:19276608/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:2218309/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:28709562/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:14147772/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:5386069/1‑68 (MQ=255) cGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAttt < 1:83998/68‑1 (MQ=255) cGGCAAAGTGATTCAGCTGGACGAGTAAGTTTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAttt < 1:32385419/68‑1 (MQ=255) ggCAAAGTGATTCTGCTGGACGAGTAACTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAtttt > 1:18668788/1‑68 (MQ=255) gCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGATGCCGGATGTGTTGCATCCGGCATGGCAttttt > 1:26573654/1‑68 (MQ=255) aaaGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTa < 1:15091448/67‑1 (MQ=255) aaaGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTAt < 1:14446705/68‑1 (MQ=255) gATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtgtg < 1:10093961/68‑1 (MQ=255) gATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtgtg > 1:10615106/1‑68 (MQ=255) tCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGtt > 1:18083067/1‑68 (MQ=255) tCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGtt > 1:25945445/1‑68 (MQ=255) tgctgGAAGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTg > 1:27739210/1‑67 (MQ=255) gctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGc < 1:13045540/68‑1 (MQ=255) ggACGAGTAAGTGTGAAGTTGCCGGATGTGTCGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtg < 1:25424973/68‑1 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtgt < 1:3096641/67‑1 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtgt < 1:18413077/67‑1 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtgt < 1:30254118/67‑1 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtgt < 1:23862848/67‑1 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:22874591/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:15869811/1‑68 (MQ=255) tAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtttga > 1:32649814/1‑64 (MQ=255) taaaaatgccaTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCt < 1:6985112‑M1/57‑1 (MQ=255) aaGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAg < 1:34255188/66‑1 (MQ=255) aGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCtt > 1:16827258/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg > 1:86345/1‑68 (MQ=255) tgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAgg > 1:3347144/1‑68 (MQ=255) tgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAgg > 1:16496996/1‑68 (MQ=255) tgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAgg > 1:28145585/1‑68 (MQ=255) gAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAgg < 1:10971106/67‑1 (MQ=255) gAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAgg < 1:31440064/67‑1 (MQ=255) gAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGt < 1:9438775/68‑1 (MQ=255) aaGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGtt > 1:20743215/1‑68 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCTTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCATGAGGTTg > 1:7347243/1‑68 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:26345219/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:21534577/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:13222814/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:14873158/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:407990/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:12546492/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:17765568/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:3651264/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:17014308/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCAGGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:27408955/1‑68 (MQ=255) TGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGa > 1:27006988‑M1/1‑67 (MQ=255) | CGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAA > CP009273/138397‑138531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |