| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 725820 | 0 (0.000) | 5 (0.010) | 4/104 | NT | 100% | coding (782/4194 nt) | rhsC | Rhs family putative polymorphic toxin |
| ? | CP009273 | = 3613270 | NA (NA) | coding (719/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor | |||||
Only 100 of 113 total aligned reads displayed.
ATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATAT > CP009273/725754‑725887 | aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCA < 1:647617‑M1/67‑1 (MQ=255)aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCA > 1:6332059‑M1/1‑67 (MQ=255)aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCA > 1:22550578‑M1/1‑67 (MQ=255) tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAcc < 1:32631678‑M1/68‑3 (MQ=255) tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAcc < 1:17445856‑M1/68‑3 (MQ=255) tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAcc < 1:32206078‑M1/68‑3 (MQ=255) ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca > 1:31236486/1‑68 (MQ=35) ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca > 1:28052381/1‑68 (MQ=35) ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca > 1:10958961/1‑68 (MQ=35) ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca > 1:1471337/1‑68 (MQ=35) ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca > 1:10059823/1‑68 (MQ=35) gCGTCACTTCCGGCTGGTACTGACCCCGCAGGCGCAGCGGGCAGAAGCAGCCCGGCAccatccgtcac > 1:5953528‑M1/1‑57 (MQ=255) gCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAccatccgtcac > 1:21314144‑M1/1‑57 (MQ=255) cTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAccatccgtcacgccggt > 1:4990319‑M1/1‑51 (MQ=255) cTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAccatccgtcacgccggtgatttcgccgctg > 1:4950730‑M1/1‑38 (MQ=255) ccACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAccatccgtcacgccggtgatttcgccgctgaat > 1:12919088‑M1/1‑34 (MQ=255) gCCCGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtc < 1:26822529‑M1/68‑61 (MQ=255) gCCCGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtc < 1:2383155‑M1/68‑61 (MQ=255) gCCCGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtc < 1:13617243‑M1/68‑61 (MQ=255) cccGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacg > 1:20561870‑M1/1‑7 (MQ=255) cccGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacg > 1:547705‑M1/1‑7 (MQ=255) ccGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtct < 1:22411214‑M1/67‑62 (MQ=255) cgtcaccatccgtcacgccggtgttttcgccgctgaagtccccggcggcttcgcggtggaacgtctgt < 1:10546767‑M1/65‑64 (MQ=255) cGGCAccatccgtcccgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:13493252‑M1/68‑64 (MQ=255) cGGCAccatccgtcacgccggtgatttcgccgctgaattccccggcggcttcgcggtggaacgtctgt < 1:10546754‑M1/68‑64 (MQ=255) cGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:16952763‑M1/68‑64 (MQ=255) cGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:7489408‑M1/68‑64 (MQ=255) cGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:13103037‑M1/68‑64 (MQ=255) cGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:8345806‑M1/68‑64 (MQ=255) cGGCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacggctgt < 1:18653065‑M1/68‑64 (MQ=255) cGGCAccatccgtcacgccggtgatatcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:15733087‑M1/68‑64 (MQ=255) gCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:10035810‑M1/1‑3 (MQ=255) gCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:2918065‑M1/1‑3 (MQ=255) gCAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:15507710‑M1/1‑3 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:28277813‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:32971317‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:23846662‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:30184639‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:29963199‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:22713959‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:13810014‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:8833689‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:21368454‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:20834965‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt < 1:20585476‑M1/67‑66 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:2010214‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:19160113‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:11130987‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgt > 1:8412615‑M1/1‑2 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtg < 1:11889816‑M1/66‑65 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:34473597‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:1617495‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:16765517‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:17302261‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:12931280‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:28298431‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:33167384‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:27136374‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:3878340‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:25003016‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:5826204‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgt < 1:8972271‑M1/65‑64 (MQ=255) cAccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcgggggaacgtctgt < 1:29538394‑M1/65‑64 (MQ=255) cAccatccgtcacgacggtgatttcgccgctgaattcaccggcggcttcacggtggaacgtctgtgt > 1:14823802‑M1/1‑2 (MQ=255) accatctgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:28332581‑M1/1‑1 (MQ=255) accatccgtcacgccggtgctttcgccgctgaattccccggcggcttcgcggtggaacgtctgtgtgc > 1:33861235‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccggtgaattcaccggcggcgtcgcggtggaacgtctgtgtgc > 1:28555769‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtttgc > 1:13916700‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:26589013‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:15504115‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:15588685‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:18935236‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:20068199‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:2039295‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:7440703‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:6892355‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:2225975‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:6270443‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:6131177‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:22532769‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:5885692‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:23068516‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:26125585‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:2774006‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:31412540‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:30131357‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:28582781‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:32795716‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:15242230‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:13585426‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:3331195‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:33622932‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:301941‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:34440993‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:2728558‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:27085175‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:4571686‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:4582646‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgc > 1:4946688‑M1/1‑1 (MQ=255) accatccgtcacgccggtgatttcgccgatgaattcaccggcggcttcgctgaggaacgtctgtgtgc > 1:11799715‑M1/1‑1 (MQ=255) | ATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATAT > CP009273/725754‑725887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |