| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2502173 | 263 (0.630) | 15 (0.040) | 8/92 | NT | 7.0% | coding (733/966 nt) | glk | glucokinase |
| ? | CP009273 | = 2502211 | 180 (0.530) | coding (695/966 nt) | glk | glucokinase | |||||
Only 100 of 390 total aligned reads displayed.
GCGGCACGATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGC > CP009273/2502107‑2502240 | ggCACGATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCaa < 1:18969163/67‑1 (MQ=255) aCGATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACg > 1:32957614/1‑68 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:24439557/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:17669740/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:8184436/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:27042128/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:16595285/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:28458564/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:716034/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:31076454/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:495408/68‑1 (MQ=255) aTACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc > 1:30493627/1‑67 (MQ=255) aTACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc > 1:6564282/1‑67 (MQ=255) aTACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGACGCCAAAACGGc > 1:8644293/1‑67 (MQ=255) tACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGccc < 1:22230132/68‑1 (MQ=255) tACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTACCGCCAAAACGGcc < 1:4627796/67‑1 (MQ=255) aCCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCa > 1:4078543/1‑68 (MQ=255) aCCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCa > 1:6938162/1‑68 (MQ=255) aCCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCa > 1:11271419/1‑68 (MQ=255) aCCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCa > 1:8008314/1‑68 (MQ=255) aCCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAAAGGCCCa > 1:20517468/1‑68 (MQ=255) gcccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGAGTGCCGCCgggcagtggcgcgg > 1:1719278‑M1/1‑54 (MQ=255) ccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAAt > 1:27695941/1‑67 (MQ=255) ccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATg > 1:21373621/1‑68 (MQ=255) gcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGGCAGATTGCCGCCAAAACGGCCCATAATGAc < 1:13629888/68‑1 (MQ=255) gcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATTAc < 1:1091423/68‑1 (MQ=255) gcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGAc < 1:25376521/68‑1 (MQ=255) gcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGAc < 1:22257892/68‑1 (MQ=255) gcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGAc < 1:12545792/68‑1 (MQ=255) aTAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCa > 1:24697115/1‑68 (MQ=255) aaCACGCCGCCAAATGTCCCGAGATTGAGCGCCATATTGCCGCCAAAACGGCCCATAATGACGCaaaa < 1:10654931/68‑1 (MQ=255) aaCACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCaaaa < 1:11686400/68‑1 (MQ=255) aaCACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCaaaa < 1:7526087/68‑1 (MQ=255) aaCACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCaaaa < 1:19895073/68‑1 (MQ=255) aaCACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCaaa > 1:10295281/1‑67 (MQ=255) acacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCgcgcattgtcgctgttttgcgtcat > 1:1006587‑M1/1‑43 (MQ=255) acacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAAc > 1:19487601/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGTGATTGAGCGCCAGATTGCCGGCAAAACGGCCCATAATGACGCAAAACa > 1:32112160/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGCGATTGAGCGCCAGATTGCCGCCgcggattgtcgcggttttgggtcatt > 1:31250720‑M1/1‑42 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCGATAATGACGCAAAACa > 1:1522389/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAACCa > 1:14482844/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:29706205/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:28950132/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:28100128/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:14121024/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:27764123/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa < 1:14262276/68‑1 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa < 1:2165186/68‑1 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:27462080/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:18226436/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:33170125/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa < 1:32655053/68‑1 (MQ=255) cgccgcCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGc > 1:23717625/1‑68 (MQ=255) cgccAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGAc < 1:11631681/68‑1 (MQ=255) cgccAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGAc < 1:18830081/68‑1 (MQ=255) cAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAAt < 1:20941353/68‑1 (MQ=255) aTGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATgc > 1:34207939/1‑67 (MQ=255) aTGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATgc > 1:28813164/1‑67 (MQ=255) gTCCCGAGATTGAGCGCCAGATTGCCGCCACAACGGCCCATAATGACGCAACACAGCGACAATGCGCg < 1:23302406‑M2/68‑2 (MQ=255) gTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCg < 1:29372013‑M2/68‑2 (MQ=255) cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc > 1:25754751‑M2/1‑65 (MQ=255) cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc > 1:17855821‑M2/1‑65 (MQ=255) cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc > 1:18302903‑M2/1‑65 (MQ=255) cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc > 1:13441618‑M2/1‑65 (MQ=255) cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc > 1:31528713‑M2/1‑65 (MQ=255) agaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggca < 1:32762935‑M2/68‑8 (MQ=255) agaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggca < 1:5400318‑M2/68‑8 (MQ=255) gaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:95217‑M2/68‑9 (MQ=255) aTTGCGCGCCAGATTGCCGCCAAAACGGCCCATAATGCCGCTAAACAGCGACAATGCGCggcggcaa < 1:24737777‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:23047743‑M2/67‑9 (MQ=255) ttGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa > 1:11142498‑M2/1‑58 (MQ=255) gcgcCAGATTGCCGCCgcgcattgtcggtgttttgcgtctttatgggccgttttggcggcaatctggc > 1:780601‑M1/1‑16 (MQ=255) gcgcCAGATTGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatcggt > 1:11927108‑M1/1‑16 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:22510892/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:31924104/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:22943828/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:16913948/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:4572038/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:12284721/67‑1 (MQ=255) cgcCAGATTGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcg > 1:15010287‑M1/1‑15 (MQ=255) gcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaatctggcgc > 1:32414014‑M2/1‑52 (MQ=255) cgATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa > 1:28252701/2‑65 (MQ=255) ttGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaat < 1:26784959‑M1/67‑60 (MQ=255) ttGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaat < 1:5752473‑M1/67‑60 (MQ=255) ttGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaat < 1:33918615‑M1/67‑60 (MQ=255) ttGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaat < 1:26156225‑M1/67‑60 (MQ=255) ttGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaat < 1:20180156‑M1/67‑60 (MQ=255) ttGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaa > 1:32574633‑M1/1‑8 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:30751084/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:24591144/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:16103488/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGt < 1:4361318/67‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGt < 1:19368290/67‑1 (MQ=255) gccgccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTca > 1:12201503/1‑67 (MQ=255) gccgccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTca > 1:15516906/1‑67 (MQ=255) cgccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagc < 1:30128805/67‑1 (MQ=255) gccgcgcattgtcgctggtttgcgtcattatgggccgttttggcggcaatctggcgctccagctcggg > 1:23627778‑M1/1‑3 (MQ=255) gccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagcca > 1:9086158/1‑68 (MQ=255) cgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaatctcgggac < 1:13305188‑M1/68‑68 (MQ=255) cAAACCGGCCCATAATGACGCAAAACACCGACAAGGCGCggcggcaatctggcgctcaatctcgggac > 1:18392526‑M2/1‑39 (MQ=255) | GCGGCACGATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGC > CP009273/2502107‑2502240 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |