| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4620353 | 307 (0.740) | 8 (0.020) | 4/94 | NT | 2.8% | intergenic (‑14/‑197) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble |
| ? | CP009273 | = 4620382 | 300 (0.860) | intergenic (‑43/‑168) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 573 total aligned reads displayed.
GCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAA > CP009273/4620315‑4620449 | gCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCaa > 1:8482163/1‑68 (MQ=255) tGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCTTGATAATGAGTTTTCAAag < 1:11379337‑M2/67‑3 (MQ=255) tGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAagg > 1:26629879‑M2/1‑65 (MQ=255) tGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAagg > 1:29166694‑M2/1‑65 (MQ=255) tGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAag < 1:24276251‑M2/67‑3 (MQ=255) ggTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggc > 1:20841372‑M2/1‑64 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:27387759‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:4239575‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:5423879‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:22665890‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:1385868‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:23376511‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:26253836‑M2/68‑6 (MQ=255) gTATAAACGAATTGAGCCACGTTGGACTTAGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcg < 1:16526786‑M2/68‑6 (MQ=255) ataAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaa < 1:3437095‑M2/68‑8 (MQ=255) aaaCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagt > 1:7389643‑M2/1‑59 (MQ=255) aaaCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagt > 1:19519091‑M2/1‑59 (MQ=255) aaaCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagt > 1:20164878‑M2/1‑59 (MQ=255) aaaCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagt > 1:6153712‑M2/1‑59 (MQ=255) aaaCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagt > 1:6815291‑M2/1‑59 (MQ=255) aaCGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAgtg < 1:15328518/68‑1 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCTTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:3203234/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:27459248/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:22459769/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:2208842/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:31605674/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:10335189/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:25728184/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:28599629/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:9266765/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:17264075/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:8921418/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:16020873/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:14420957/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:7815498/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:13618824/1‑68 (MQ=255) cGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATAGTGATAATGAGTTTTCAAAGGCGAAGTGTa > 1:19245833/1‑68 (MQ=255) ttGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCt < 1:17688874/68‑1 (MQ=255) gCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCtttt > 1:10914448/1‑67 (MQ=255) cACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCttttt < 1:4492652/66‑1 (MQ=255) gTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCg < 1:33755077/68‑1 (MQ=255) tGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagtccaacgtggctcaattcg > 1:18478099‑M2/1‑41 (MQ=255) tGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGcc < 1:14238890/68‑1 (MQ=255) tGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGcc < 1:28910988/68‑1 (MQ=255) tGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGc < 1:28746626/67‑1 (MQ=255) tGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGc < 1:20430841/67‑1 (MQ=255) tGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGc < 1:11598242/67‑1 (MQ=255) tGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGc < 1:10597073/67‑1 (MQ=255) tGGACTTCGCCTCTATGTTTATCGTGATAATGAGATTACAAaggcgaaggccaacgtggctcaattcg > 1:18937442‑M2/1‑41 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAcggcgaagcccaacgtggctcaattcgtt > 1:23513394‑M2/1‑38 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:30331727/1‑68 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:27562303/1‑68 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:33391445/1‑68 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:9739187/1‑68 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:18830606/1‑68 (MQ=255) aCTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:16177871/1‑68 (MQ=255) cTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa > 1:30218465/1‑67 (MQ=255) cTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTaa < 1:14090287/67‑1 (MQ=255) cTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAAt < 1:32436323/68‑1 (MQ=255) cTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAAt < 1:29691942/68‑1 (MQ=255) ttCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAaggcgaagtccaacgtggctcaattcgtttat > 1:15032647‑M2/1‑36 (MQ=255) gCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCa > 1:12108271/1‑68 (MQ=255) ctctATGTTTATCGTGATAATGAGTTTTCAAaggcgaagt > 1:478892‑M2/1‑31 (MQ=255) ctctATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGc < 1:25136470/68‑1 (MQ=255) ctctATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGc < 1:3395462/68‑1 (MQ=255) tGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTc < 1:11782249/68‑1 (MQ=255) gTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCg > 1:22985626/1‑68 (MQ=255) gTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCg > 1:8258224/1‑68 (MQ=255) gTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCg > 1:17865041/1‑68 (MQ=255) gTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCg > 1:32823113/1‑68 (MQ=255) gTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCg > 1:10052126/1‑68 (MQ=255) ttATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGa > 1:18292632/1‑67 (MQ=255) ttATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGa > 1:31045004/1‑67 (MQ=255) ttATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGAt < 1:19843909/68‑1 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:21123671/1‑67 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:25392211/1‑67 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:3467362/1‑67 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:16962126/1‑67 (MQ=255) tCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCa > 1:12768752/1‑67 (MQ=255) cGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCAcc < 1:30701072/68‑1 (MQ=255) cGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCAc > 1:3839517/1‑67 (MQ=255) gATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTc < 1:21498797/68‑1 (MQ=255) gATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTc > 1:7193625/1‑68 (MQ=255) aaTGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCa < 1:24738121/68‑1 (MQ=255) aaTGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCa < 1:30605566/68‑1 (MQ=255) aaTGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCa < 1:5866267/68‑1 (MQ=255) aTGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCag < 1:9524723/68‑1 (MQ=255) aGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaa > 1:26017334/1‑68 (MQ=255) ttttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaa > 1:4939333/1‑68 (MQ=255) tttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaa < 1:2689376/67‑1 (MQ=255) tttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaa < 1:12404214/67‑1 (MQ=255) tttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaa < 1:33548396/67‑1 (MQ=255) tttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaa < 1:3221800/67‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:29939195/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:6434127/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:24007478/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:15812367/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:12981966/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:28019243/68‑1 (MQ=255) ttCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCagtaaaagt < 1:33042710/68‑1 (MQ=255) | GCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCCCCGCCTAATCCCAGCCGGTCGATCACCCTCGCAGTAAAAGTAAAA > CP009273/4620315‑4620449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |