| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 142767 = | 378 (0.910) | 19 (0.050) | 8/94 | NT | 6.5% | coding (1200/1230 nt) | yadE | putative polysaccharide deacetylase lipoprotein |
| ? | CP009273 | 142790 = | 231 (0.660) | coding (1223/1230 nt) | yadE | putative polysaccharide deacetylase lipoprotein | |||||
Only 100 of 501 total aligned reads displayed.
AAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCT > CP009273/142723‑142855 | aaCGAGTTTATATCTTAAGAACGGATTCGCTGGAGACCATGTCGCGGCTGGTGAGTAACAAGCCGCAg < 1:11101623/68‑1 (MQ=255) aaCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAg < 1:9521789/68‑1 (MQ=255) aaCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAg < 1:20490152/68‑1 (MQ=255) aaCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAg > 1:13439381/1‑68 (MQ=255) aaCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAg < 1:12079878/68‑1 (MQ=255) aaCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAg < 1:10783434/68‑1 (MQ=255) aataCTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg < 1:12242199/65‑1 (MQ=255) aCGCCTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTACCCAGCCGCAgg > 1:771158/1‑68 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg < 1:31545176/68‑1 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg < 1:15711685/68‑1 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg < 1:23958725/68‑1 (MQ=255) aCGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAgg > 1:2095843/1‑68 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg < 1:3169943/68‑1 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg < 1:18228442/68‑1 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAggg < 1:27468249/68‑1 (MQ=255) cGACTTTATATCTTAAGAACGGATTCGCTGGAGACGACGTCGCGGCTGGTGAGTAACCAGCCGCAggg < 1:32979339/68‑1 (MQ=255) gACTTTATATCTTTAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:1517260/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:17085892/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:3764054/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:19982916/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:10027533/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:3038348/68‑1 (MQ=255) gACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGa < 1:33781356/68‑1 (MQ=255) gaaagcgattccggtacaggttgcttgattgttatccctgcggctggttactcaccagccgcAGGGa < 1:24927006‑M2/5‑1 (MQ=255) gaaagcgattccggtacaggttgcttgattgttatccctgcggctggttactcaccagccgcAGGGa < 1:31062479‑M2/5‑1 (MQ=255) cTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATa < 1:14641972/68‑1 (MQ=255) tataTCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACa < 1:28646091/68‑1 (MQ=255) tataTCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACa < 1:5728119/68‑1 (MQ=255) tataTCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACa < 1:12494267/68‑1 (MQ=255) tataTCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACa < 1:475777/68‑1 (MQ=255) tataTCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACa < 1:22965843/68‑1 (MQ=255) gattccggtacaggttgcttgattgttatccctgcggctggttactcaccagccgcAGGGATAACa < 1:1512049‑M2/10‑1 (MQ=255) atCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATc > 1:6792835/1‑68 (MQ=255) atCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATc > 1:28914486/1‑68 (MQ=255) atCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATc > 1:31900202/1‑68 (MQ=255) atCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATc > 1:34032218/1‑68 (MQ=255) atCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATc > 1:34436204/1‑68 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCCGCCGCAGGGATAACAATCa > 1:17638112/1‑68 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCa > 1:21984321/1‑68 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCa > 1:15837544/1‑68 (MQ=255) tCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCa < 1:5323045/68‑1 (MQ=255) ttAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAg < 1:19457071/68‑1 (MQ=255) aGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa < 1:20768273/68‑1 (MQ=255) acaggttgcttgattgttatccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa < 1:888310‑M1/42‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:29783500/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:29455147/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa > 1:1845677/1‑65 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAcc < 1:11354132/67‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAc < 1:4240932/66‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAc < 1:23291927/66‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAAc < 1:26477919/66‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCt < 1:11972599/68‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCt < 1:14184008/68‑1 (MQ=255) aCGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCt < 1:27230555/68‑1 (MQ=255) aggttgcttgattgttatccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCaa < 1:10231940‑M1/42‑1 (MQ=255) ggttgcttgattgttatccctGCGGCGGGTGAGTAACCAGCCGCCGGGATTACAATCAAGCAACCTGt < 1:30614773‑M1/47‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:14994985/68‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:25769115/68‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:27795382/68‑1 (MQ=255) ggATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGt < 1:24766530/68‑1 (MQ=255) aTTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTa < 1:17848349/67‑1 (MQ=255) aTTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTa < 1:28510816/67‑1 (MQ=255) aTTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTa < 1:8677359/67‑1 (MQ=255) ttCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTAcc > 1:8151593/1‑68 (MQ=255) cGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCgg < 1:9139313/68‑1 (MQ=255) tGGAGACGATGTCGCGGCTGGTGAGTACCCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGaa > 1:16644870/1‑67 (MQ=255) tGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGaa > 1:25989026/1‑67 (MQ=255) agaCGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATc > 1:32324774/1‑66 (MQ=255) agaCGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCg < 1:640445/67‑1 (MQ=255) gttatccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCt < 1:25333256‑M1/59‑1 (MQ=255) gaCGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGATTCGCt > 1:19621713/1‑68 (MQ=255) aCGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCtt > 1:28280814/1‑68 (MQ=255) cGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCtt > 1:25537149/1‑67 (MQ=255) cGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCt < 1:1385435/66‑1 (MQ=255) tccctGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTc < 1:31196333‑M1/62‑1 (MQ=255) cgcgGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGt < 1:17252597/68‑1 (MQ=255) cgcgGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGt < 1:33581553/68‑1 (MQ=255) GCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGt < 1:14368481‑M1/67‑1 (MQ=255) GCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGt < 1:9231338‑M1/67‑1 (MQ=255) ggCTGGTGAGTAACCAGCCGC‑GGGAAAACAATCAAGCAACCTGTTCCGGGATCGGTTTCGCGGGACgg > 1:26709250/1‑67 (MQ=25) GGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACg < 1:6010107‑M1/68‑1 (MQ=255) CTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGtt < 1:26158878‑M1/68‑1 (MQ=255) CTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGt > 1:22499183‑M1/1‑67 (MQ=255) TGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGtt > 1:21326629‑M1/1‑67 (MQ=255) gAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGtttcatt < 1:24423907/68‑1 (MQ=255) gAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGtttcat < 1:1399541/67‑1 (MQ=255) gAGTAACCAGCCGCAGGGATAACAATCAAGCAACCAGTACCGGAATCTCTTTCGCGGTACGtttcatt < 1:5044496/68‑1 (MQ=255) aGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGtttcatt > 1:27095696/1‑67 (MQ=255) aaCCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTttcatttcat > 1:2182909/1‑68 (MQ=255) aaCCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTttcatttcat > 1:12935687/1‑68 (MQ=255) accagccgcAGGGATAACAATCAAGCACCCTGTACCGGAATCGCTTTCGCTGTACTTTtcatttcatt > 1:6970447‑M2/10‑68 (MQ=255) accagccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTtcatttcatt > 1:24273054‑M2/10‑68 (MQ=255) accagccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTtcatttcatt > 1:11625585‑M2/10‑68 (MQ=255) gccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTc > 1:22324450‑M2/6‑67 (MQ=255) gccgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTc > 1:10485019‑M2/6‑67 (MQ=255) cgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGcc < 1:19052985‑M2/65‑1 (MQ=255) cgcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGcc < 1:19237111‑M2/65‑1 (MQ=255) gcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCt < 1:4523677‑M2/66‑1 (MQ=255) gcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCt < 1:23548868‑M2/66‑1 (MQ=255) gcAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCt < 1:3258265‑M2/66‑1 (MQ=255) | AAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAACAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCT > CP009273/142723‑142855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |