| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 902734 | 176 (0.420) | 10 (0.030) | 6/98 | NT | 5.8% | coding (1005/1431 nt) | ybjT | putative NAD‑dependent oxidoreductase |
| ? | CP009273 | = 902785 | 170 (0.470) | coding (954/1431 nt) | ybjT | putative NAD‑dependent oxidoreductase | |||||
Only 100 of 265 total aligned reads displayed.
AAGCAGCAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCCTCTT > CP009273/902718‑902852 | agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc > 1:6660918‑M2/1‑67 (MQ=255) agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:24795305‑M2/68‑2 (MQ=255) agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:19917781‑M2/68‑2 (MQ=255) agcagcAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:28977085‑M2/68‑2 (MQ=255) gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:920944‑M2/67‑2 (MQ=255) gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:18355370‑M2/67‑2 (MQ=255) gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:20729678‑M2/67‑2 (MQ=255) gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:12375311‑M2/67‑2 (MQ=255) gcagcaAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTc < 1:33714549‑M2/67‑2 (MQ=255) aaGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgcc > 1:8784025‑M2/1‑61 (MQ=255) aaGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgcc > 1:32757943‑M2/1‑61 (MQ=255) aGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCg > 1:13586558/1‑68 (MQ=255) ggCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCgg > 1:19275738/1‑68 (MQ=255) cTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCggg < 1:4519548/67‑1 (MQ=255) cTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCgg < 1:24859637/66‑1 (MQ=255) cTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCgg < 1:26747788/66‑1 (MQ=255) cTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCgg < 1:27990249/66‑1 (MQ=255) tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc < 1:1866480/67‑1 (MQ=255) tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc < 1:23008122/67‑1 (MQ=255) tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc < 1:1859094/67‑1 (MQ=255) tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc < 1:26721450/67‑1 (MQ=255) tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc < 1:1569367/67‑1 (MQ=255) tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc < 1:739518/67‑1 (MQ=255) tGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGc < 1:7693932/67‑1 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg < 1:15004205/68‑1 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg < 1:14126414/68‑1 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg < 1:3821163/68‑1 (MQ=255) ggACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg < 1:9089423/68‑1 (MQ=255) gACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg > 1:31792516/1‑67 (MQ=255) gACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAgg > 1:24595840/1‑67 (MQ=255) tttAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGa < 1:17879467/67‑1 (MQ=255) tttAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGa < 1:19127607/67‑1 (MQ=255) tttAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGa < 1:14027151/67‑1 (MQ=255) ttAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGc < 1:16563582/68‑1 (MQ=255) aaCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgt < 1:33569996/68‑1 (MQ=255) aaCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgt < 1:12089786/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:297759/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:32098922/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:32447911/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:30982974/68‑1 (MQ=255) aCGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtc < 1:13944535/68‑1 (MQ=255) cGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcg < 1:3434770/68‑1 (MQ=255) ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt > 1:3476388/1‑68 (MQ=255) ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt > 1:5020314/1‑68 (MQ=255) ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt > 1:18467063/1‑68 (MQ=255) ggTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGcgtcgt > 1:23563577/1‑68 (MQ=255) aaaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGc < 1:21211042/68‑1 (MQ=255) aaaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGc < 1:33398417/68‑1 (MQ=255) acccccgcCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgctttatggcaggtagtga > 1:13100528‑M2/3‑36 (MQ=255) aaCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcc < 1:22010014/68‑1 (MQ=255) aCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTcgccagccttgctgctttatggcaggtagtgaa > 1:10715803‑M2/1‑35 (MQ=255) aCCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcc > 1:19499791/1‑67 (MQ=255) ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcccc > 1:31082706/1‑68 (MQ=255) ccccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGcccc < 1:28100229/68‑1 (MQ=255) cccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCa > 1:19841470/1‑68 (MQ=255) cccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCa > 1:10145822/1‑68 (MQ=255) ccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAg < 1:16925246/68‑1 (MQ=255) ccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAg > 1:26051912/1‑68 (MQ=255) ccGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAg < 1:8271959/68‑1 (MQ=255) gCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc < 1:1426880/68‑1 (MQ=255) gCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTc > 1:33173799/1‑68 (MQ=255) cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg < 1:26536173/67‑1 (MQ=255) cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg < 1:5601028/67‑1 (MQ=255) cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg < 1:4675831/67‑1 (MQ=255) cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg < 1:30294013/67‑1 (MQ=255) cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg < 1:10336036/67‑1 (MQ=255) cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCg < 1:23861352/67‑1 (MQ=255) cTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTAGTAGCCCCAGTCg < 1:27458877/67‑1 (MQ=255) tGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCt < 1:22665959/68‑1 (MQ=255) ttGTCAATATAACCGTACTCCGGTCGCCAGCGTGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGa < 1:16837210/68‑1 (MQ=255) ttGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTgg < 1:10041856/67‑1 (MQ=255) ttGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGa < 1:6480394/68‑1 (MQ=255) ttGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGa < 1:25564603/68‑1 (MQ=255) aaaaTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGa < 1:30364111/68‑1 (MQ=255) aaaaTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGa < 1:32933577/68‑1 (MQ=255) aaTAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGAcc < 1:28385471/68‑1 (MQ=255) tAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAg < 1:33696633/68‑1 (MQ=255) aaCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGt < 1:9548249/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:24519997/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:4126845/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:22598208/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:21154751/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:5406102/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:6286441/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:32631756/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:14661489/68‑1 (MQ=255) aCCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGGCGTAGCCCCAGTCGCTGGAGTTGACCAGtt < 1:15151124/68‑1 (MQ=255) gTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGttttt < 1:8162788/68‑1 (MQ=255) tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcctc < 1:29494520/68‑1 (MQ=255) tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct > 1:11036440/1‑67 (MQ=255) tCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct > 1:17608621/1‑67 (MQ=255) tCCGGTCGCCAGCGGGCAAAGGCCTCAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcct > 1:26245217/1‑67 (MQ=255) cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTcctcct < 1:29988394/68‑1 (MQ=255) cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTcctcct < 1:6901231/68‑1 (MQ=255) cGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTCcctcct < 1:24218892/68‑1 (MQ=255) ggTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTtcctcc > 1:12721354/1‑66 (MQ=255) tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct < 1:32258367/67‑1 (MQ=255) tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct < 1:13021359/67‑1 (MQ=255) tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct < 1:28021998/67‑1 (MQ=255) tCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCctct < 1:4416428/67‑1 (MQ=255) | AAGCAGCAAGGCTGGCGGACGTTTTAACGGTAAACCCCGCCTGTTTGGCAAAATAACCGTACTCCGGTCGCCAGCGGGCAAAGGCCTGAGCGTCGTAGCCCCAGTCGCTGGAGTTGACCAGTTTTTCCTCCTCTT > CP009273/902718‑902852 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |