| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 910536 = | NA (NA) | 14 (0.040) | 5/92 | NT | 12.3% | intergenic (‑223/+272) | ybjE/aqpZ | putative transporter/aquaporin Z |
| ? | CP009273 | 910538 = | 121 (0.290) | intergenic (‑225/+270) | ybjE/aqpZ | putative transporter/aquaporin Z | |||||
Only 100 of 419 total aligned reads displayed.
ACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAG > CP009273/910471‑910605 | ccTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCGGGGGCAGCCCACATGGa < 1:22257843/67‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:1581670‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:34296662‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:26440686‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:14014622‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:21906231‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:22975765‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:19028561‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:12127313‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:9670349‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:11062482‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:24735393‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:32223338‑M2/1‑1 (MQ=255)acggCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:21389968/4‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:31422724/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:30964060/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:30925466/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:21096718/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:20024985/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:20321327/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:28664782/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:10016383/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:2313063/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:2501429/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:24228328/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:15218016/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:12748991/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:8277369/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:1065533/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:18151383/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:5512847/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:4709260/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:32520809/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:17264809/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:1734035/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACACGGa < 1:13466/68‑1 (MQ=255) tcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAt > 1:3202580‑M2/67‑68 (MQ=255) tcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAt > 1:25715895‑M2/67‑68 (MQ=255) tGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGAtg < 1:17509655/68‑1 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:33045611‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:1959168‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:14443371‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:11888545‑M2/66‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacctccAtgt > 1:27114295‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacctccAtgt > 1:13283286‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:8654239‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:6187021‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:10317514‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:15480380‑M2/65‑68 (MQ=255) ttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcggcccacatccATGTgg < 1:7849877‑M2/6‑1 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:18457946/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:25853381/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:33345383/1‑68 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTggg < 1:9454716/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:18550733/1‑67 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacctccATGTgg > 1:19898628‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:23349837‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:30462830‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:17021076‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:5853851‑M2/61‑66 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:33758732/1‑65 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCAACATGGATGTgg > 1:7224921/1‑65 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccccatccATGTGGGCt > 1:34091941‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:3954945‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:3987057‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:8916336‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:9214832‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:1150007‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:29068358‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:28051689‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:27548553‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgccccctcagcccccgtccATGTGGGCt > 1:32637605‑M2/59‑67 (MQ=255) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:18255456/1‑68 (MQ=39) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:21673794‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:12522643‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:26636655‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:14888836‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:20458881‑M2/58‑67 (MQ=255) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:19270556/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:28265300/1‑67 (MQ=35) cgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTGAgg > 1:16277633‑M2/53‑65 (MQ=255) tggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:5126448/1‑68 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:31728950/67‑1 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCACTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGcgcg < 1:5390101/68‑1 (MQ=25) cGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGt < 1:8148292/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:16573294/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:23967624/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:25313161/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:13575956/67‑1 (MQ=35) aaTCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAg > 1:6598143/1‑68 (MQ=35) aTCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAgg > 1:29456318/1‑68 (MQ=35) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:13745082/68‑1 (MQ=33) cGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:4462952/68‑1 (MQ=31) taacatccctgtaaaccgcgcccgcagcccacatccATGTGGGCTGAGGGCGCGTTTTACAGGGAt < 1:3674293‑M2/30‑1 (MQ=255) taacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTGAGGGCGCGTTTTACAGGGAt < 1:31229561‑M2/30‑1 (MQ=255) taacatccctgtaaaacgcgccctcagcccacatccATGGGGGCTGAGGGCGCGTTTTACAGGGAt < 1:26131183‑M2/30‑1 (MQ=255) taacagccctgtaaaacgcgccctcagcccccatccCTGTGGGCTGAGGGCGCGTTTTACAGGGAt < 1:29883414‑M2/30‑1 (MQ=255) taacagccctgtaaaacgcgccctcagcccacatccATGTGGGCTGAGGGCGCGTTTTACAGGGAt < 1:20865415‑M2/30‑1 (MQ=255) ccccatcgATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGt < 1:20672619‑M2/58‑1 (MQ=255) ATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATaa < 1:4187841‑M2/67‑1 (MQ=255) | ACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAG > CP009273/910471‑910605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |