| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 66560 = | 287 (0.750) | 369 (1.580) +CGTTTTTTTGGATGGAGGAATT |
38/68 | NT | 61.0% | intergenic (‑28/‑314) | araD/araC | pseudogene, truncated/ara regulon transcriptional activator; autorepressor |
| ? | CP009273 | = 3509273 | 489 (1.270) | intergenic (‑1/+106) | dam/damX | DNA adenine methyltransferase/cell division protein that binds to the septal ring | |||||
Only 100 of 795 total aligned reads displayed.
TTATCCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/66626‑66560‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA < CP009273/3509273‑3509208 |||||||||||||||||||||| CCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTT > 1:24086569/1‑68 CCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTT > 1:26892392/1‑68 CATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTT < 1:30168372/68‑1 AGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTG > 1:15373955/1‑68 ATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGA > 1:1731881/1‑68 CGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAG > 1:15111945/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:20765213/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:13920687/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:339553/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:122285/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAG < 1:1175843/67‑1 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGA < 1:22672620/66‑1 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGA < 1:2244009/66‑1 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGA < 1:30608317/66‑1 TCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAAT > 1:8928299/1‑68 CCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAAT > 1:30870167/1‑67 CCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAAT > 1:11275963/1‑67 CCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATG > 1:6463052/1‑68 CTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGA > 1:18335865/1‑68 CGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAA > 1:28591298/1‑68 GCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAA > 1:14575273/1‑68 ATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGC > 1:4907700/1‑67 GCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTT > 1:19506343/1‑68 GCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTT > 1:21001608/1‑68 CAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:14211720/68‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:19283406/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:468736/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:10297674/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:24766554/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:16854539/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:27926901/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:5474764/67‑1 TCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTG > 1:9329594/1‑68 CTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAG > 1:25063448/1‑68 CTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAG > 1:11526555/1‑68 TACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGT < 1:7403451/68‑1 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:7019111/1‑68 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:31589111/1‑68 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG < 1:23549138/68‑1 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG < 1:413714/68‑1 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:8516668/1‑68 CTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:31091672/1‑68 CTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:6725524/1‑68 TGTTTCTCCCTACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGG < 1:20597714/68‑1 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGG < 1:1205764/68‑1 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:13686318/1‑67 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:4449285/1‑67 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:24430905/1‑67 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:13024407/1‑68 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:27146710/1‑68 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC < 1:2379258/68‑1 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:18528740/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:23325123/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:21920672/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:6143916/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:30357338/1‑68 TCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG < 1:18094322/68‑1 CTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGG < 1:1062521/68‑1 TCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG > 1:3515455/1‑68 TCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG < 1:7239141/68‑1 CATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGC > 1:10967056/1‑68 CATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGC > 1:782300/1‑68 CATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGC > 1:21280430/1‑68 ATACCCGTTTTTTTGGATGGAGGTATTCATGTAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCA < 1:13403153/68‑1 ATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCA < 1:28285348/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:21516318/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:29749090/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG > 1:22947443/1‑68 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:16338296/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:8263218/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:25206406/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:25756716/68‑1 CCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT > 1:10003489/1‑68 CGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTAT < 1:29008869/68‑1 TTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCT < 1:12640860/68‑1 TTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTG < 1:385611/68‑1 TTTGGATGGAGGAATTCATGAAGAAAAATCGCGC‑TTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:16591954/68‑1 tttGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:5797719/65‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGACGTGGGCAGGGGGCAAGTATCCCCTGC < 1:26614383/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:20353490/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:5193782/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:26089426/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:19903368/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTATGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:3140465/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCGTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:2634556/68‑1 TGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCT > 1:30073909/1‑68 ATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGA > 1:2543525/1‑68 ATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGA > 1:16008833/1‑68 ATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGA > 1:29302622/1‑68 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:29388023/67‑1 AATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATAT < 1:27370831/67‑1 AATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATAT < 1:1774753/67‑1 AATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATAT < 1:9639989/67‑1 ATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTA < 1:18946439/68‑1 TTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA < 1:14897236/68‑1 TTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA < 1:15719123/68‑1 TCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA > 1:31973434/1‑67 TCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA > 1:28019856/1‑67 TCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA > 1:27735538/1‑67 TCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA > 1:22334879/1‑67 |||||||||||||||||||||| TTATCCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/66626‑66560‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA < CP009273/3509273‑3509208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |