| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 442683 | 305 (0.790) | 38 (0.120) | 10/90 | NT | 10.7% | coding (479/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | = 442722 | 388 (1.250) | coding (440/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 130 total aligned reads displayed.
TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/442606‑442683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgccgcCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < CP009273/442722‑442657 TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:10576101/68‑1TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:8922940/68‑1TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:18443/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT < 1:31137262/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT < 1:15579809/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT < 1:24048010/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:18761695/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:7712093/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:28262168/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:7886576/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:28554003/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:1189680/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:29950087/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:24608742/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:9055301/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:24110858/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:20862122/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:29763495/1‑65 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:15995084/1‑67 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:2701349/1‑67 AAATGGCGATGGCATAGGAGTGAGTCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:16392723/67‑1 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:30653616/67‑1 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:22556403/67‑1 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:11205765/67‑1 CTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGGGATCGGCTACTGTGCGGTAACCG > 1:27440801/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAG > 1:13604266/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGGAACCGGTGAG > 1:31750004/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCGACTGTGCGGTAACCGGTGAG > 1:5966539/1‑68 AGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGGTCGGGTACTGGGCGGTCCCCGGTGAGT > 1:23213420/1‑67 AGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGCTCGGCTACTGTGCGGTAACCGGTGAGT > 1:21186215/1‑67 AGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACGGGTGAGT > 1:21972960/1‑67 AGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACGGTGCGGTAACCGGTGAGT > 1:16317227/1‑67 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGGTACTGTGCGGTTACCGGTGCGTTCG > 1:13960003/1‑68 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTACCCGGTGAGTTCG > 1:7327897/1‑68 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCG > 1:15487435/1‑68 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGGGATCGGCGACTGGGCGGTTGCCGGTGAGTTCG > 1:11653039/1‑68 GCTGAAGATAGCCAGCAGGATAGCTGCGCCGCCGGTGATGGGCGACTGTGCGGTAACCGGTGACTTa > 1:1571218/1‑66 AGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:17688002/1‑68 AGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:7859434/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATGGGCTACTGTGCGGTAACCGGGGAGTTCGATAGCc > 1:15210606/1‑67 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:6637317/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGGGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:4983589/1‑68 ATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:16411345/1‑67 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGTCGC > 1:18903363/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:17903035/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:31265144/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:1169233/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:1132321/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:959659/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGGGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:16753526/1‑68 CCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA > 1:291507/1‑68 CAGCAGGATAGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA > 1:13806307/1‑67 GGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTATCCGGTGAGTTCGATAGCGGCGCCGCGAT > 1:3633588/1‑67 CGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTG < 1:23485775/67‑1 CGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTG < 1:238239/67‑1 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:31196515/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:26783554/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:10435562/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:26546411/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:26513488/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:1289158/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:24819897/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:24426636/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:11749223/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:22306460/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:21600151/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:11119393/1‑65 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGG < 1:29520644/68‑1 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:22898134/1‑67 TGCGACGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:21948709/1‑67 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:11006843/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:12633215/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:7469425/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:3638053/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:3121577/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:11091215/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:20410475/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:23330996/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:10269834/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:9864026/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGGGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:11292060/68‑1 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:19291042/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:17490229/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:21992938/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:23692875/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:13031356/1‑68 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:13295058/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:6861880/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:5053554/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:4601708/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:4396027/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:26247582/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:15434690/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:19765398/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:26673706/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:26444933/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTAT < 1:7641594/67‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTAT < 1:10527015/67‑1 GCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < 1:4992874/68‑1 GCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT > 1:17746742/1‑68 TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/442606‑442683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgccgcCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < CP009273/442722‑442657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |