| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2436000 = | 228 (0.590) | 19 (0.060) | 7/94 | NT | 8.2% | coding (758/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | 2436103 = | 232 (0.720) | coding (861/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 106 total aligned reads displayed.
ACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2436074‑2436000‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGG > CP009273/2436103‑2436168 ACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCAC < 1:24976798/68‑1ACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCAC < 1:17235173/68‑1 GCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCAag > 1:4337439/1‑65 GCGCTGGCAATACCACAGCCGATAATCGCCGCTTCCCCTTTGCTGCTGCCCGTGCGGTTAAACCACG > 1:26326029/1‑67 CGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC > 1:31777833/1‑68 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC < 1:20320485/67‑1 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC > 1:25721991/1‑67 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC < 1:10042042/67‑1 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC < 1:15673996/67‑1 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC < 1:519720/67‑1 CTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGC > 1:16727073/1‑68 GGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGG < 1:1161594/68‑1 GGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGG < 1:1601705/68‑1 GGCAATACAACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCcg > 1:28233336/1‑66 CAATACCACCGCCTATAATCCCCGCTTCCCGTTTGCTGCTGCCCGGGCGTTTAAACCACGGCGCGGC < 1:20243940/67‑1 CAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGC < 1:30005301/67‑1 ATACCCCCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGGGCGGTTAAACCACGGCGCGGCTGG < 1:29971485/68‑1 CCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAG < 1:22676627/68‑1 CCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAG < 1:31755912/68‑1 CACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGG < 1:6467662/68‑1 CACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGG < 1:29818166/68‑1 CACCGCCGATAATCGCCGCTTCCCGTTAGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGG < 1:29650406/68‑1 CACCGCCGATAATCGCCGCTTCCCGCTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGG < 1:7888311/68‑1 GCCGATAATCGCCGCGTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAAC < 1:21774419/68‑1 ccATACTCGCCGCTTCCCGTGTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:16548975/66‑1 CGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:23396422/68‑1 CGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:5298254/68‑1 CGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTCCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:27454260/68‑1 CGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGGGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:11785125/68‑1 CGATAATCGCCGCTTCCCGGTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACG < 1:9517813/67‑1 tacTCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGCTTT < 1:30966392/65‑1 GCTTCCCGTTTGCTGCGGCCCGCGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCG < 1:27543955/68‑1 GCTCCCCGTGTGCTGCGGCCCGGGCGGTTAAACCACGGCGCGGCGGGCAGGTAACGCTTTATTGCGCG < 1:6907171/68‑1 tcCCCGTTTGCCGCGGCCCCGGCGGTAAAACCACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGA < 1:9318782/66‑1 tcCCCGTTGGCTGCTGCCCGGGCGGTAACACCCCGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGA < 1:31780851/66‑1 TTCCCGTGCGCTGCCGCCCGGGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGA < 1:10525023/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC < 1:30262318/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC < 1:28020729/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC < 1:27700286/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:8296407/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:9419557/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:25223684/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:26798032/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC < 1:24906805/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC < 1:24329274/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC < 1:10241457/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:11230669/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:11257947/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC < 1:20654366/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:23977326/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGATTCCGGCAATC < 1:13625371/68‑1 CGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG < 1:8405456/68‑1 CGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG < 1:15072960/68‑1 CGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG < 1:1369066/68‑1 CGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG < 1:11199847/68‑1 CGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:3952428/1‑67 CGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:3438431/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGC < 1:29931493/68‑1 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGC < 1:711557/68‑1 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:23155650/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:3762680/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:7742209/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:4414868/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:11645594/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:1717229/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:30335361/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:30084810/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:21257914/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:24260681/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:29381129/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:28969303/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:7083909/1‑67 GCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCC > 1:15538552/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGCGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:6716353/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:7370766/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:7148257/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:14045789/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:4656317/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:6682537/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:12701962/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:16418796/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:25355084/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:30746525/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:17541697/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:29949192/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:20625577/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:28010456/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:278304/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:20997140/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:22017536/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCC < 1:18226054/67‑1 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGGGCTTCCGGCAATCGCCA > 1:22299351/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGAGCTTCCGGCAATCGCCA > 1:31561597/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCG > 1:6145034/1‑43 CGCGGCTGGAAGGTAACGCGTTATTGCCCGGATGAGGCCACCGCACTGGGTGCTTCCGGCAATCG > 1:15397101/1‑65 CGCGGCTCGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:19328204/1‑68 GGCTGGCAGGTACCGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGG < 1:30827955/68‑1 GGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGG < 1:18911334/68‑1 GGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGG < 1:20724108/68‑1 GGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGG < 1:24711434/68‑1 ACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2436074‑2436000‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGG > CP009273/2436103‑2436168 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |