New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3832491 =	262 (0.680)	20 (0.060)	7/96	NT	8.9%	coding (884/924 nt)	yicL	EamA family inner membrane putative transporter
	?	CP009273	3832524 =	186 (0.560)					coding (917/924 nt)	yicL	EamA family inner membrane putative transporter

TTTTAACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3832565‑3832491 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcggcATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGACT  >  CP009273/3832524‑3832589                                                                                                                                               TTTTAACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTG                                                                           >  1:15020921/1‑68  TTTAACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTG                                                                           >  1:6630790/1‑67  TTTAACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTG                                                                           >  1:15638057/1‑67   TTAACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGC                                                                         <  1:11284161/68‑1   TTAACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGC                                                                         <  1:25411850/68‑1   TTAACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGC                                                                         <  1:3532642/68‑1    TAACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGC                                                                         >  1:28918394/1‑67    TAACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGC                                                                         >  1:14586594/1‑67     AACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGC                                                                       >  1:19945290/1‑68     AACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGC                                                                       >  1:26132501/1‑68     AACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGC                                                                       >  1:16806863/1‑68      ACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGCCGATTTATTTTTCTGGCGCG                                                                      >  1:3117680/1‑68      ACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:20290202/1‑68      ACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:22219246/1‑68      ACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:24129433/1‑68      ACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:29040504/1‑68      ACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      <  1:7064256/68‑1      ACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:26424471/1‑68      ACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:11780333/1‑68      ACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:31793092/1‑68       CGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGG                                                                     <  1:12261635/68‑1       CGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGG                                                                     <  1:26353373/68‑1       CGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGG                                                                     <  1:12535305/68‑1       CGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGG                                                                     <  1:3621238/68‑1       CGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:30817242/1‑67       CGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:20351288/1‑67       CGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:3281507/1‑67       CGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCG                                                                      >  1:18338377/1‑67       CGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTAATTTTCTGGCGCGG                                                                     <  1:920116/68‑1       CGGTGGCGCGGTGCCTGGCTGGTAATCCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGG                                                                     <  1:1833234/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGTTTTATTTTTCTGGCGCGGC                                                                    <  1:20717258/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    <  1:27306218/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    <  1:1053015/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    <  1:7960072/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    >  1:4733286/1‑68        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    <  1:4212541/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    <  1:13766943/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    <  1:26556948/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    <  1:26279345/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    <  1:20720473/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    >  1:19920606/1‑68        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    <  1:19958108/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCAGGCGCGGC                                                                    <  1:27534426/68‑1        GGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTATGGCGCGGC                                                                    >  1:26395238/1‑68        GGTGGCGCGGTGCCTGGCTGCTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC                                                                    <  1:14934758/68‑1             CGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAA                                                                <  1:26190918/67‑1              GCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGT                                                              <  1:19368000/68‑1              GCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAG                                                               <  1:21398919/67‑1              GCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAG                                                               <  1:19025910/67‑1              GCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAG                                                               <  1:17634636/67‑1              GCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAG                                                               <  1:3859944/67‑1              GCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAG                                                               <  1:7329721/67‑1              GCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAG                                                               <  1:5596509/67‑1              GCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAG                                                               <  1:25328920/67‑1              GCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAG                                                               <  1:17534398/67‑1              GCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAG                                                               <  1:15933509/67‑1              GCGGTGCCTGGCTGGTAATTCTCACATATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGT                                                              <  1:22380376/68‑1              GCGGTGCCTGGCTGGTAAATCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGT                                                              <  1:1778626/68‑1              GCGGGGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAG                                                               <  1:11773506/67‑1              GCGGGGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTATTCTGGCGCGGCATAAG                                                               <  1:6984943/67‑1                GGTGCCTGGCTGGTAATTCTCACTTCTGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGA                                                            <  1:17112381/68‑1                GGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGA                                                            <  1:14649523/68‑1                GGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTG                                                             <  1:612685/67‑1                  TGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAG                                                           <  1:16151749/67‑1                  TGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAG                                                           <  1:16002114/67‑1                  TGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAG                                                           <  1:23107025/67‑1                  TGCCTGGCTGGTAAATCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAG                                                           <  1:159425/67‑1                     CTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAGAATT                                                       <  1:19510706/68‑1                     CTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAGAATT                                                       <  1:21317915/68‑1                     CTGGCTGGTAATTCTCACTTAAGCCGCGCCGGACGATATATTTTTCTGGCGCGGCATAAGTGAGAATT                                                       <  1:820745/68‑1                          TGGTAATTCTCACTTATGCCGCGCCGGACTATTTATTTTTCTGGCGCGGCATAAGTGAGAATTACCA                                                   <  1:1327563/67‑1                          TGGTAATTCTCACTTATCCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAGAATTACCA                                                   <  1:30073113/67‑1                          TGGTAATTCACACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAGAATTACCA                                                   <  1:23648808/67‑1                           GGTAATTCTCACTTATGCCGCGCCGTACGATTTATTTTTCTGGCGCGGCATAAGTGAGAATTACCAGC                                                 <  1:11433725/68‑1                           GGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAGAATTACCAGC                                                 <  1:31264122/68‑1                           GGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAGAATTACCAGC                                                 <  1:6434645/68‑1                            GTAATTCTCACTTCTGCCGCGCCGGACGATTTATTTTTCTGGCGCGGCATAAGTGAGAATTACCAGC                                                 <  1:4934779/67‑1                                                                    GGCGCGGCATATGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTA        >  1:27590604/1‑68                                                                      CGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAATATGGTTTCTGCCGCTTTAGC      >  1:188377/1‑68                                                                      CGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAG       <  1:5597277/67‑1                                                                       GCGGCATAAGTGAGAATTACCAGCCAGGCAGCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCG     >  1:21823340/1‑68                                                                       GCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCG     >  1:9051959/1‑68                                                                       GCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCG     >  1:32080814/1‑68                                                                       GCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGC      >  1:465384/1‑67                                                                         GGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGAC   <  1:16847293/68‑1                                                                         GGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGA    <  1:23075393/67‑1                                                                         GGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGA    <  1:28807292/67‑1                                                                         GGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGA    <  1:7720218/67‑1                                                                         GGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGA    <  1:23030622/67‑1                                                                         GGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGA    <  1:15225245/67‑1                                                                         GGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGA    <  1:26272393/67‑1                                                                         GGCATAAGTGAGAATTACCACCCACGCACCTCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGA    <  1:22284077/67‑1                                                                           CATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGACT  <  1:26726728/67‑1                                                                           CATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGACT  <  1:3778681/67‑1                                                                           CATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGACT  <  1:12652869/67‑1                                                                           CATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGACT  <  1:19235021/67‑1                                                                                                                                               TTTTAACGGTGGCGCGGTGCCTGGCTGGTAATTCTCACTTATGCCGCGCCGGACGATTTATTTTTCTGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3832565‑3832491 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcggcATAAGTGAGAATTACCAGCCAGGCACCGCGCCACCGTTAAAAATGGTTTCTGCCGCTTTAGCGACT  >  CP009273/3832524‑3832589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.