| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 257 (0.670) | 24 (0.070) | 8/96 | NT | 9.3% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 246 (0.750) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 350 total aligned reads displayed.
GGCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAT > CP009273/3215146‑3215280 | ggCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTgcgcgc < 1:21952482/68‑1 (MQ=255) tggttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaacc > 1:18600549‑M1/67‑68 (MQ=255) tggttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaacc > 1:3622888‑M1/67‑68 (MQ=255) gCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc > 1:27020354/1‑68 (MQ=255) gCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc > 1:27541452/1‑68 (MQ=255) gCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc > 1:15712216/1‑68 (MQ=255) gCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTACGcgcc > 1:18498958/1‑68 (MQ=255) ggttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaacc < 1:23514624‑M1/2‑1 (MQ=255) ggttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaacc < 1:16154079‑M1/2‑1 (MQ=255) ttACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc > 1:2577201/1‑66 (MQ=255) ttACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGcgcc > 1:13420340/1‑66 (MQ=255) gttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaacc < 1:27308662‑M1/2‑1 (MQ=255) gttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaacc < 1:14146195‑M1/2‑1 (MQ=255) ttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGc > 1:10094190‑M1/64‑67 (MQ=255) ttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGc > 1:4131535‑M1/64‑67 (MQ=255) ttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGc > 1:28881671‑M1/64‑67 (MQ=255) ttgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGc > 1:19142637‑M1/64‑67 (MQ=255) tACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCt < 1:28311251/68‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:27210160‑M1/5‑1 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt > 1:30455354‑M1/63‑67 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt > 1:20457156‑M1/63‑67 (MQ=255) tgatatagaagtcgatgatttctttactgatgcgtgccagatcgatatccaccgcatcgtaaCCGCt < 1:12341848‑M1/5‑1 (MQ=255) aCCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCt > 1:29527421/1‑67 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:20857343/1‑68 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:11546322/1‑68 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:9479053/1‑68 (MQ=255) aGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCa > 1:5781830/1‑68 (MQ=255) cATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgcg < 1:19630336/68‑1 (MQ=255) aTTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgcgc > 1:3388932/1‑68 (MQ=255) aTTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAgcgc < 1:11265842/68‑1 (MQ=255) aaaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGtt < 1:18682545/68‑1 (MQ=255) aaaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGtt < 1:31826031/68‑1 (MQ=255) aaaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGtt < 1:11754629/68‑1 (MQ=255) aaaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTg > 1:17982684/1‑68 (MQ=255) aaaaCGTCACCGGGATTTTAATTGTCGTCAAACACACGCACGACCTGCGCCCGGCAGACAGCGCGGTg > 1:14885592/1‑68 (MQ=255) aaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa < 1:19977143/68‑1 (MQ=255) aaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa < 1:8733620/68‑1 (MQ=255) aaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa < 1:24124568/68‑1 (MQ=255) aaaCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGa < 1:13497265/68‑1 (MQ=255) aCGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGagc > 1:22146027/1‑66 (MQ=255) aCGGCACCGGTATTTTAATGGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGAcc < 1:5558854/68‑1 (MQ=255) cGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCg > 1:15272254/1‑68 (MQ=255) ggcACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGGGGTGACCGa < 1:3768665/66‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:18117521/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:29309127/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:31453978/68‑1 (MQ=255) gTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGa < 1:8109481/68‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGAc < 1:14386728/67‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGAc < 1:24025217/67‑1 (MQ=255) cACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:5229673/68‑1 (MQ=255) aCCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACa < 1:5963001/67‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACTGACAat < 1:7328900/68‑1 (MQ=255) ccGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAat < 1:16959150/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:23144358/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:174772/68‑1 (MQ=255) cGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAata < 1:4926839/68‑1 (MQ=255) ggTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAtta > 1:23970164/1‑67 (MQ=255) aTTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCt < 1:13108399/67‑1 (MQ=255) aTTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCt < 1:19452014/67‑1 (MQ=255) ttttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGt < 1:29715727/68‑1 (MQ=255) ttAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGttt < 1:10700795/68‑1 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGGGTTGACCGACAATATCTGTTTTa > 1:1281294/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTa > 1:1267863/1‑68 (MQ=255) aaTTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTa > 1:15152361/1‑68 (MQ=255) ttGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGCCCGACAATATCTGTTTTATc > 1:14430950/1‑68 (MQ=255) ttGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATc > 1:10564305/1‑68 (MQ=255) ttGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATc > 1:6302270/1‑68 (MQ=255) tGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATc > 1:30226883/1‑67 (MQ=255) gTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGa < 1:14567842/68‑1 (MQ=255) cGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGAc < 1:26470155/67‑1 (MQ=255) cGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGAc < 1:10252431/67‑1 (MQ=255) cGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGAc < 1:78626/67‑1 (MQ=255) cGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGAc < 1:11183247/67‑1 (MQ=255) cGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTCTTTTATCGAc < 1:23697991/67‑1 (MQ=255) cAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACttt < 1:13912596/67‑1 (MQ=255) cAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACttt < 1:5088495/67‑1 (MQ=255) cAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACttt < 1:12486191/67‑1 (MQ=255) tcgatatccaccgcatcgtaaCCGCTGCCAGCGCGTTGCCCGCCAAGATCTGTTGTATCGGCTTTcag < 1:8525124‑M1/47‑2 (MQ=255) ccccCGCGCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGa < 1:9090233/68‑1 (MQ=255) cccgcccgccCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGaa > 1:26700889/3‑67 (MQ=255) aCGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAAcc < 1:11295338/68‑1 (MQ=255) ccaccgcatcgtaaCCGCTGCCCGCGCGTTGACCGCCAAGATGTGTTTTATCGACGTTGACGAACCCg < 1:7086178‑M1/54‑1 (MQ=255) ccaccgcatcgtaaCCGCTGCCCGCGCGTTGACCGACAATATCTGTTTTTTCGACTTTCACGCACCCg < 1:25537270‑M1/54‑1 (MQ=255) cccgcccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCg > 1:31672816/1‑67 (MQ=255) ccgcatcgtaaCCGCTGCGAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCAAGAAcccgcca < 1:15773116‑M1/57‑4 (MQ=255) cccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGc > 1:29861383/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATTTCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:17093166/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:26046575/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:24569238/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:27964191/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:13738042/1‑68 (MQ=255) ccTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCg > 1:30606835/1‑68 (MQ=255) atcgtaaCCGCTGCCAGCGCGTTGCCCGACAATATCTGTTTTATCGACTTTCACGCACCCGGCAGCgg < 1:28059394‑M1/61‑1 (MQ=255) atcgtaaCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCgg < 1:16661404‑M1/61‑1 (MQ=255) tcgtaaCCGCTGCCAGCGCGTTGACCGACAAAATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGt < 1:29098896‑M1/62‑1 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCggcgc < 1:1091655/67‑4 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGt < 1:31132765/65‑1 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTAc > 1:22848238/1‑68 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:25032408‑M1/67‑1 (MQ=255) CCGCTGCCAGCGCGTTGCCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAt < 1:6161589‑M1/68‑1 (MQ=255) | GGCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAT > CP009273/3215146‑3215280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |