| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3630213 | 316 (0.820) | 37 (0.130) | 14/84 | NT | 13.9% | coding (558/1203 nt) | yhiN | putative oxidoreductase |
| ? | CP009273 | = 3630199 | 221 (0.770) | coding (572/1203 nt) | yhiN | putative oxidoreductase | |||||
Only 100 of 398 total aligned reads displayed.
CCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGCA > CP009273/3630146‑3630280 | ccgccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTC < 1:782000‑M1/68‑1 (MQ=255) cAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggt < 1:5933623‑M1/68‑5 (MQ=255) gCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGgcagc > 1:27598595/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCACCGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCgggtgcca < 1:6471995‑M1/68‑9 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca < 1:9493634‑M1/68‑9 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca < 1:20892808‑M1/68‑9 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgc < 1:31202177‑M1/66‑7 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:27163387/1‑68 (MQ=255) ccTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACg > 1:28364965/1‑68 (MQ=255) cTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGt > 1:1038903/1‑68 (MQ=255) gTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTg > 1:27386179/1‑68 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:11776438/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcgattcac > 1:15553699‑M1/1‑52 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccatt > 1:7434441‑M1/1‑52 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:24553942/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:7636081/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:12554554/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:16542641/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:31655430/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:26398821/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGAAGCCCGTTGAgg > 1:23265443/1‑67 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:21728991/1‑68 (MQ=255) ctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGGCtggtgccattcactctgc < 1:19709257‑M1/68‑19 (MQ=255) tCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaaa > 1:3747733/1‑68 (MQ=255) cGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAAt > 1:336493/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:6304036/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:19300019/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:17555648/1‑68 (MQ=255) aCGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCg < 1:8240765/68‑1 (MQ=255) ggTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGc > 1:9309424/1‑68 (MQ=255) tATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATc < 1:6874410/68‑1 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:5520890/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:1870927/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:2789137/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:12594025/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:16707187/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:14979990/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:26029435/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:31298209/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:22830142/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:29302269/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:13257992/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGTACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:22070844/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:24097542/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:25197131/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:3661551/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:18894203/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagtt > 1:11384551‑M1/1‑27 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAccc > 1:21219429/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:14256434/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:26564695/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:28606547/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:11154031/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:2781605/1‑68 (MQ=255) gAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCaa > 1:508608/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:26251682‑M1/1‑22 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:31054800/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:28964606/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:525690/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:21823331/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:15848278‑M1/1‑20 (MQ=255) gCACCAGACCCGCGCGGGTCGGCTGCACGTTGCGGCCAAATTGTTCGGCAATCTTATAACCAACCGGc > 1:3904050/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCCGCACGTTGAGGCCAAATTGATCGGGAATCTTATAACCAAACGGc > 1:29694/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAATTTGTTCGGCAATCTTATAACCAAACGGc > 1:8710370/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATACCCAAACGGc > 1:4617743/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACTGc > 1:1291842/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:10040959/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:20521378/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:13747761/1‑68 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctg > 1:7010254‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctg > 1:10954981‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctg > 1:6206007‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:16943417/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:31881408/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:31961812/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:12413883/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:17861296/1‑67 (MQ=255) gACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgg > 1:1806710‑M1/1‑14 (MQ=255) gACCCGCGCGGGTCtggtgccattcacgctgcataaaccgttggtcgaagaggtacaggtgctggcgg > 1:30747340‑M1/1‑14 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGCcgcg > 1:23609133/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:29240653/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:8500757/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:4403743/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:26654876/1‑67 (MQ=255) cccGCGCGGTTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:28837080/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATACCCAACCGGCGCCgcgc > 1:14745810/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:20333338/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:8884911/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:16167456/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:25486099/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:20692807/1‑67 (MQ=255) ccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGccc > 1:10545021/1‑68 (MQ=255) gcgcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAg < 1:29956980/68‑1 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc < 1:24893912/67‑1 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:18314079/1‑67 (MQ=255) gggTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGcccc > 1:22279542/1‑68 (MQ=255) tCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtg > 1:28455263‑M1/1‑2 (MQ=255) tCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGc > 1:17948272/1‑68 (MQ=255) ctggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtgc < 1:756321‑M1/67‑67 (MQ=255) cGGCAGCACGTTGAGGCCAAATTTTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGCa > 1:30390065/1‑68 (MQ=255) | CCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGCA > CP009273/3630146‑3630280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |