| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3632677 | NA (NA) | 5 (0.010) | 4/112 | NT | NA | intergenic (+176/+68) | pitA/uspB | phosphate transporter, low‑affinity; tellurite importer/universal stress (ethanol tolerance) protein B |
| ? | CP009273 | = 4127852 | NA (NA) | intergenic (‑267/+8) | yijF/gldA | DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase | |||||
Only 100 of 747 total aligned reads displayed.
TGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGC > CP009273/3632610‑3632744 | tGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGtt < 1:20663880/68‑1 (MQ=255)tGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGtt < 1:21017958/68‑1 (MQ=255)tGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGtt < 1:30968881/68‑1 (MQ=255) gCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGttt > 1:28720517/1‑68 (MQ=255) cAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTg > 1:24003043/1‑68 (MQ=255) ttCAATAGATTGCAGAGATTATGTAGGCATGATAAGAGTAGAGCATCAGGCAATTTTGCGTTTGTaa > 1:23535818/1‑67 (MQ=17) aTAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGt < 1:16673460/68‑1 (MQ=255) aTAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGt < 1:7405251/68‑1 (MQ=255) tAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGtc < 1:2214948/68‑1 (MQ=255) aGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGtc > 1:12587779/1‑67 (MQ=255) aGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGtc > 1:13059381/1‑67 (MQ=255) aGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGtc > 1:32041114/1‑67 (MQ=255) aGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGtc > 1:18347350/1‑67 (MQ=255) aGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGtc > 1:17075898/1‑67 (MQ=255) aTTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGt < 1:29252016/64‑1 (MQ=255) agagATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCgt > 1:7711457/1‑67 (MQ=255) agagATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCgg > 1:29053905/1‑68 (MQ=255) agagATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCgg > 1:24749734/1‑68 (MQ=255) gataTTATGTATGCCTGATAAGCTTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCggg < 1:8528167/65‑1 (MQ=17) agaTTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCggg > 1:28246949/1‑67 (MQ=255) agaTTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCggg > 1:2639548/1‑67 (MQ=255) gaTTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCggg < 1:4416659/66‑1 (MQ=255) gaTTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCggg < 1:9883241/66‑1 (MQ=255) ttATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAg > 1:6781159/1‑68 (MQ=255) ttATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAg < 1:19477997/68‑1 (MQ=255) ttATGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTc < 1:21657598/66‑1 (MQ=255) tATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGt < 1:3849008/68‑1 (MQ=255) tATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGt < 1:21282253/68‑1 (MQ=255) tATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGt < 1:13302840/68‑1 (MQ=255) tGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:18759242/1‑68 (MQ=255) tGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:8626456/1‑68 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:31858218/1‑67 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:7192989/1‑67 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGAGGGTCAGttt > 1:18103381/1‑67 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGGAATTTTGCGTTTGGAATGAGGCTCGAGCGGGGCAGttt > 1:27096944/1‑66 (MQ=18) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:15658633/1‑66 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:5368307/1‑66 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:24166474/1‑66 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:24439186/1‑66 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:9655696/1‑66 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:5033307/1‑66 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:27610031/1‑66 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:25718973/1‑66 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:6363912/1‑66 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:28440583/1‑66 (MQ=255) tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGttt > 1:18583145/1‑66 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTg > 1:2993912/1‑68 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGt < 1:12090670/46‑1 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg > 1:12322366/1‑67 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg > 1:1655261/1‑67 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg > 1:18946849/1‑67 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg > 1:14442920/1‑67 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg > 1:10589624/1‑67 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg > 1:19223512/1‑67 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg > 1:1965997/1‑67 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg > 1:20085629/1‑67 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg > 1:19926578/1‑67 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTg > 1:12750624/1‑66 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCAAATTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTgg > 1:14640439/1‑67 (MQ=255) tAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGc < 1:13442974/67‑1 (MQ=255) tAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCt > 1:20397263/1‑68 (MQ=255) tAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCt > 1:23633740/1‑68 (MQ=255) tAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCt > 1:3617408/1‑68 (MQ=255) aGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCttt > 1:9232943/1‑68 (MQ=255) aGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCttt > 1:5797027/1‑68 (MQ=255) cGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCttttt > 1:16839853/1‑68 (MQ=255) gTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCtttttt > 1:13808265/1‑68 (MQ=255) gTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCtttttt > 1:23222933/1‑68 (MQ=255) gTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCtttttt > 1:22809243/1‑68 (MQ=255) gTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCtttttt > 1:22572487/1‑68 (MQ=255) gTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCtttttt > 1:21752420/1‑68 (MQ=255) gTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCtttttt > 1:10222714/1‑68 (MQ=255) gTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCtttttt > 1:11201282/1‑68 (MQ=255) gTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCtttt < 1:4693007/66‑1 (MQ=255) aGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTa > 1:31371876/1‑68 (MQ=255) cgcATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTAt > 1:6937586/1‑67 (MQ=255) gcATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGc > 1:31514710/1‑68 (MQ=255) gcATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGc > 1:11642910/1‑68 (MQ=255) gcATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGc > 1:15358766/1‑68 (MQ=255) gcATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGc < 1:17315589/68‑1 (MQ=255) gcATAAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGc > 1:10848568/1‑68 (MQ=255) aTCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCg < 1:26786649/67‑1 (MQ=255) tCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGtt < 1:25097364/68‑1 (MQ=255) cAGGCAATTATGCGTTTGTAATCAGTCTCGAGCGGGGCAGTTTACTGGCCCGCGTTTTTTATGCGtta < 1:799932/68‑1 (MQ=255) gCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGttatta > 1:27897350/1‑68 (MQ=255) cAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGttatt < 1:16077845/66‑1 (MQ=255) cAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGttatt < 1:17477326/66‑1 (MQ=255) cAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGttat < 1:22357630/65‑1 (MQ=255) aaTTTTGCGTTTGTAATCAGTCTCGAGCGTGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTattatt < 1:1505557/68‑1 (MQ=255) aaTTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTattatt < 1:3373434/68‑1 (MQ=255) aaTTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTattatt < 1:8259594/68‑1 (MQ=255) aaTTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTattatt < 1:14838189/68‑1 (MQ=255) aaTTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTattatt < 1:14089498/68‑1 (MQ=255) aaTTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTattatt < 1:30548021/68‑1 (MQ=255) ttGCGTTcaaactcccggcttgtccgggtgtttggacgcaaaattgcctgatgcgctacgcttatcag > 1:1788076‑M1/1‑7 (MQ=255) ttGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTg < 1:25377583/68‑1 (MQ=255) cGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAg > 1:8997000/1‑68 (MQ=255) ttGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGtta < 1:408195/53‑1 (MQ=255) ttGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGc < 1:26077101/68‑1 (MQ=255) ttGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGc < 1:10061561/68‑1 (MQ=255) | TGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGC > CP009273/3632610‑3632744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |