| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1228601 = | 342 (0.890) | 18 (0.060) | 6/94 | NT | 6.5% | intergenic (‑115/+31) | dsbB/nhaB | oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I/sodium:proton antiporter |
| ? | CP009273 | 1228623 = | 228 (0.710) | intergenic (‑137/+9) | dsbB/nhaB | oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I/sodium:proton antiporter | |||||
Only 100 of 408 total aligned reads displayed.
AAAAATAGGACGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAA > CP009273/1228559‑1228690 | aaaaaTAGGACGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAgt < 1:3003768/68‑1 (MQ=255)aaaaaTAGGACGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAgt < 1:3529779/68‑1 (MQ=255)aaaaaTAGGACGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAgt < 1:17823374/68‑1 (MQ=255)aaaaaTAGGACGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAgt < 1:16548868/68‑1 (MQ=255) tAGGACGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTa > 1:12835517/1‑68 (MQ=255) aGGACGCAATTGGACAATTATCGGACGAAAAGGCAAACCGGGCATTTAGATGCCCGGTAAGTTGTTa > 1:554582/1‑67 (MQ=255) gACGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCa > 1:1864974/1‑68 (MQ=255) aCGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCaa > 1:7810563/1‑68 (MQ=255) aCGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCaa > 1:13139884/1‑68 (MQ=255) cGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCaaa < 1:24630369/68‑1 (MQ=255) cGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCaaa < 1:29492531/68‑1 (MQ=255) aaTTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGc < 1:10262767/67‑1 (MQ=255) aaTTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGc < 1:7896370/67‑1 (MQ=255) tttgACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:29143528/65‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:6735291/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:3155402/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:1887347/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:20562463/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:2339272/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:10574989/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:17592905/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:28420533/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:4237297/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:25489338/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:27323113/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:24092025/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:12589083/68‑1 (MQ=255) ttGGACAATTATCGGGCGAAAAGGCAAACCGGGCATCTATATGCCCGGTAAGTTGTTATCAAAGCGtt < 1:5068349/68‑1 (MQ=255) tggatagcaacgctttgataacaacttaccgggcatataaatgcccggtAAGTTGTTATCAAAGCGtt < 1:12239600‑M2/19‑1 (MQ=255) tggatagcaacgctttgataacaacttaccgggcatataaatgcccggtAAGTTGTTATCAAAGCGtt < 1:26025014‑M2/19‑1 (MQ=255) aCAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTa > 1:22278691/1‑68 (MQ=255) aCAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTa > 1:23581834/1‑68 (MQ=255) aCAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTa > 1:9163312/1‑68 (MQ=255) aCAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTa > 1:11066630/1‑68 (MQ=255) aCAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTa > 1:17422845/1‑68 (MQ=255) aCAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTa > 1:16839068/1‑68 (MQ=255) aCAATTATCGGGCGAAAAGGCAAACCCGGCATTAATATGCCCGGTAAGGTGTAATCAAAGCGTTGATa > 1:29888908/1‑68 (MQ=255) cAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTa < 1:20230684/67‑1 (MQ=255) cAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTAt < 1:14647059/68‑1 (MQ=255) aacgctttgataacaacttACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCa < 1:15364539‑M1/49‑1 (MQ=255) aacgctttgataacaacttACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCa < 1:15121332‑M1/49‑1 (MQ=255) tATCGGGCGAGAAGGCAAACCGGGCATATAAATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCa > 1:23686944/1‑67 (MQ=38) cgctttgataacaacttaccgggcaaataaatgcccggtAAGTTGTTATCAAAGCGTTGCTATCCAGc < 1:2258444‑M2/29‑1 (MQ=255) cGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGccc > 1:6331857/1‑68 (MQ=255) cGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGccc > 1:31862321/1‑68 (MQ=255) gggCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCa < 1:2077832/68‑1 (MQ=255) gggCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCa < 1:4525840/68‑1 (MQ=255) gggCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCa < 1:24343074/68‑1 (MQ=255) gggCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGGTGTTATCAAAGCGTTGCTATCCAGCCCa < 1:11232361/68‑1 (MQ=255) ggCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCCGCCCAt > 1:15928267/1‑68 (MQ=255) ggCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCAt > 1:10461485/1‑68 (MQ=255) ggCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCAt > 1:19968702/1‑68 (MQ=255) gAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTg < 1:25237266/68‑1 (MQ=255) gAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTg < 1:23844190/68‑1 (MQ=255) gAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTg < 1:22420815/68‑1 (MQ=255) gAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTg < 1:16311242/68‑1 (MQ=255) gAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTg < 1:29758744/68‑1 (MQ=255) taacaacttaccgggcatataaatgcccggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGc < 1:30404052‑M2/37‑1 (MQ=255) aaaGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGc < 1:25035309/67‑1 (MQ=255) aaaGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGc < 1:9499656/67‑1 (MQ=255) aaaGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGc < 1:9333321/67‑1 (MQ=255) aaaGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGc < 1:7500352/67‑1 (MQ=255) aaaGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGc < 1:4825647/67‑1 (MQ=255) aaaGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGc < 1:19262160/67‑1 (MQ=255) aaaGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGc < 1:21713712/67‑1 (MQ=255) aGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATa > 1:31295609/1‑68 (MQ=255) gCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATaa > 1:11675517/1‑67 (MQ=255) acttACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATaa < 1:22196324‑M1/63‑1 (MQ=255) aaaCCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAAcc < 1:5359606/68‑1 (MQ=255) aaaCCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAAcc < 1:5163145/68‑1 (MQ=255) aaaCCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAAc < 1:19612103/67‑1 (MQ=255) ACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCAt < 1:30559936‑M1/68‑1 (MQ=255) CCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCAtt > 1:27072842‑M1/1‑68 (MQ=255) CCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCAt < 1:1791977‑M1/67‑1 (MQ=255) CGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTc < 1:28917813‑M1/68‑1 (MQ=255) CGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTc < 1:14304251‑M1/68‑1 (MQ=255) GGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCg < 1:24860715‑M1/68‑1 (MQ=255) GGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCg > 1:2644594‑M1/1‑68 (MQ=255) GGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCg > 1:20978897‑M1/1‑68 (MQ=255) GGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCg > 1:29545954‑M1/1‑68 (MQ=255) GCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCgg > 1:3804546‑M1/1‑67 (MQ=255) CATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGt > 1:28103457‑M1/1‑67 (MQ=255) CATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGt > 1:14230729‑M1/1‑67 (MQ=255) ATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGtt > 1:25765325‑M1/1‑67 (MQ=255) atatGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAgg > 1:32117692/1‑68 (MQ=255) tatGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAggg < 1:5791946/68‑1 (MQ=255) gcccggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCa > 1:29413639‑M2/8‑68 (MQ=255) cccggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCaa > 1:21198578‑M2/7‑68 (MQ=255) cccggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCaa > 1:10906814‑M2/7‑68 (MQ=255) cccggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCaa > 1:8573945‑M2/7‑68 (MQ=255) cccggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCaa > 1:13466675‑M2/7‑68 (MQ=255) cccggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCaa > 1:12000017‑M2/7‑68 (MQ=255) ccggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCaa > 1:7204660‑M2/6‑67 (MQ=255) ccggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAg < 1:30774807‑M2/63‑1 (MQ=255) cggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGc < 1:1824841‑M2/64‑1 (MQ=255) cggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGc < 1:13745964‑M2/64‑1 (MQ=255) cggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGc < 1:13793751‑M2/64‑1 (MQ=255) cggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGc < 1:2656514‑M2/64‑1 (MQ=255) ggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCg < 1:6279350‑M2/65‑1 (MQ=255) ggtAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCg < 1:31078746‑M2/65‑1 (MQ=255) | AAAAATAGGACGCAATTGGACAATTATCGGGCGAAAAGGCAAACCGGGCATTTATATGCCCGGTAAGTTGTTATCAAAGCGTTGCTATCCAGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAA > CP009273/1228559‑1228690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |