| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 11 (0.030) | 6/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 584 total aligned reads displayed.
CAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTCAC > CP009273/2925139‑2925273 | aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCa < 1:616745/67‑1 (MQ=255) aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCa < 1:20486311/67‑1 (MQ=255) aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCa < 1:21289486/67‑1 (MQ=255) aTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCAtt < 1:25648556/68‑1 (MQ=255) aTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCAtt < 1:6498328/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:28226361/68‑1 (MQ=255) ccataccgcctggtaaatgcgctgatgtgataatgccggatacgacgtttgcggcgtatccggcATTa < 1:27847543‑M2/4‑1 (MQ=255) ataccgcctggtaaatgcgctgatgtgataatgccggatacgacgtttgcggcgtatccggcATTATc < 1:30378919‑M2/6‑1 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATc > 1:21680195/1‑67 (MQ=255) ccgcctggtaaatgcgctgatgtgataatcccggatacgacgtttgcggcgtatccggcATTATcaca < 1:21048095‑M2/9‑1 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATcaca > 1:14350271/1‑67 (MQ=255) ttGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgc < 1:30187429/68‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:2080970/68‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:27436427/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:22827084/68‑1 (MQ=255) taaatgcgctgaggtgctactgccggatacgacggtcgcggcggatccggcATTATCACATCAgcgc < 1:21823790‑M2/16‑1 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCa < 1:32071220/67‑1 (MQ=255) aaatgcgctgatgtgataatgccggatacgacgtttgcggcgtatccggcATTATCACATCAGCGCa < 1:16222853‑M2/17‑1 (MQ=255) ttGGTACGGTAACGGCGAGCCGGATACCCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAttt > 1:28520766/1‑68 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAttt < 1:22321335/67‑1 (MQ=255) gTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTTTCACATCAGCGCATTTAc > 1:7720769/1‑67 (MQ=255) ggTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGc < 1:15525132/68‑1 (MQ=255) ggTAACGGCGAGCCGGATAAGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGc < 1:2658853/68‑1 (MQ=255) gTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATAAAATAAGCGCATTTACCAGGCg > 1:4069572/1‑68 (MQ=255) tAACGGCGAGCCCGATAACCCCCAAACGGCGTATACGGCATTATGACAACACCGCAATTACCAGGCgg > 1:15120319/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCCAACGTCGGTTCCGGCATTATCACATCAGCGCATTTAACAGGCGGt > 1:31567560/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAATCGTCGTATCCTGCATTATGACATCAGCGCATTTACCAGGCGGt < 1:10789480/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTTTCCGGCATTATCACATCAGCGCATTTAACAGGCggg > 1:19195701/1‑67 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTTTAACATGAGCGCATTTAACAGGCGGt > 1:24637303/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:4679157/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:23902062/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:882312/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:11638314/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:22516461/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:4333318/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:22068371/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:8379726/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:20606547/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:12513060/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:1403968/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:28927209/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:5528965/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:31775783/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:18799309/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:18555412/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:20961951/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:6633154/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:1653031/68‑1 (MQ=255) aaCGGCGAGCCCGATACGCCGCAAACGTAGTATCCGGCATTATCACAACAGCGCATTTAACACGCGGt > 1:20264042/1‑68 (MQ=255) cGGCGAGCCGGATACCCCGCAAACGTCGTATCCGGCATTTTCACATCAGCCCATTTACCAGGCGGttt > 1:16617073/1‑66 (MQ=255) ggCGAGCCGGTTTCGCCGCAAACGTGGTATCCGGCATTTTCACCTCAGCGCATTTTCCAGGCGGGATg > 1:15778108/1‑68 (MQ=255) ggCGAGCCGGATACGCCGCAATCGTCGTATCGGGCATTATCTCATCAGCGCATTTACCAGGCGGTATg < 1:10088068/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:23538788/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:25420252/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:8567287/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:3336542/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:18290297/68‑1 (MQ=255) ggCGAGCCGGATACGCCCCAAACCTAGTATCCCGCAATATAACATCAGCCCATTTACCAGGGGGTATg > 1:29523258/1‑68 (MQ=255) taatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:17587240‑M1/64‑1 (MQ=255) cGAGCCGGATACGCCGCAAACGTGGGTTCCGGCATTATCACATAAGCGCATTTTCCAGGCGGTATggg > 1:16888874/1‑67 (MQ=255) gAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGt < 1:13358992/67‑1 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:29426196‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:10310060‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:24877645‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:24507159‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:24174024‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:19448075‑M1/1‑68 (MQ=255) ATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct < 1:10918247‑M1/68‑1 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:23341154‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:5836152‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:12986074‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTa > 1:1988291‑M1/1‑68 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTa > 1:12223629‑M1/1‑68 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTa > 1:31330047‑M1/1‑68 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc < 1:9153687‑M1/68‑1 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc > 1:27085031‑M1/1‑68 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc < 1:19591207‑M1/68‑1 (MQ=255) GCCGCAAACGTCGTGTCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACaa < 1:50830‑M1/68‑1 (MQ=255) ccgcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAat > 1:25256617/1‑68 (MQ=255) ccgcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAat > 1:17905999/1‑68 (MQ=255) ccgcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGGAAAGATCTAGAat > 1:30763821/1‑68 (MQ=255) cgcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAata > 1:11931616/1‑68 (MQ=255) cgcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTAGGGTAAAGCTCTACAata > 1:13695202/1‑68 (MQ=255) gcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAatat < 1:13836696/68‑1 (MQ=255) gcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAatat < 1:8147275/68‑1 (MQ=255) gcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAatat < 1:25957862/68‑1 (MQ=255) aaaCGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATcc < 1:11519718/68‑1 (MQ=255) aaaCGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATcc < 1:3109526/68‑1 (MQ=255) aaCGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATcc > 1:6825142/1‑67 (MQ=255) aaCGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATcc > 1:23696867/1‑67 (MQ=255) cgtcgtATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCa > 1:1729552/1‑68 (MQ=255) tcgtATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCaa > 1:29958016/1‑67 (MQ=255) cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGc < 1:5726530‑M2/58‑1 (MQ=255) cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGc < 1:724734‑M2/58‑1 (MQ=255) cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGc < 1:14597293‑M2/58‑1 (MQ=255) tccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGtt > 1:29271817‑M2/7‑67 (MQ=255) tccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGtt > 1:11109651‑M2/7‑67 (MQ=255) ccggcATTATTACATCAGCGCATTTACCAGGCCGTATGGTAAAGCTCTACAATATCCTCAAGCGtt > 1:26808506‑M2/6‑66 (MQ=255) cggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCt > 1:11233645‑M2/5‑68 (MQ=255) aTTATCACATCAGCGCATTTACAAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGc > 1:3740412/1‑58 (MQ=255) | CAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTCAC > CP009273/2925139‑2925273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |