| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2930783 = | NA (NA) | 8 (0.030) | 5/90 | NT | NA | intergenic (+65/‑14) | fucI/fucK | L‑fucose isomerase/L‑fuculokinase |
| ? | CP009273 | 2930811 = | NA (NA) | coding (15/1449 nt) | fucK | L‑fuculokinase | |||||
Only 100 of 542 total aligned reads displayed.
GGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAGGG > CP009273/2930744‑2930878 | gggcGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:17957096/65‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:17464492/68‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:4574620/68‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:8874205/68‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:12880877/68‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCGGCACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:8234825/68‑1 (MQ=255)ggTCGCGCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:7320116/68‑1 (MQ=255) ccaggataacttcttgtttcataatcgctcctgcaatatagccggataacattgcttatccggctata < 1:10662423‑M2/2‑1 (MQ=255) ccaggataacttcttgtttcataatcgctcctgcaatatagccggataacattgcttatccggctata < 1:29116564‑M2/2‑1 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCATTGTTATCCGGCtata < 1:25943268/67‑1 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:6366194/67‑1 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTatat > 1:24978997/1‑68 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:29844866/68‑1 (MQ=255) tCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGc < 1:8688456/67‑1 (MQ=255) tCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGc < 1:13765944/67‑1 (MQ=255) ataacttcttgtttcataatcgctcctgcaataTAGCCGGATAAGCAATGTTATCCGGCTATATTGCa < 1:1541201‑M1/35‑1 (MQ=255) ttcttgtttcataatcgctcctgcaataTAGCCGGATAAGCAATGTTATCCGGCGATATTgcaggcgc < 1:3945621‑M1/40‑4 (MQ=255) cTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGc > 1:21912404/1‑68 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg < 1:28899561/68‑1 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg > 1:10861252/1‑68 (MQ=255) aCCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGa < 1:28626614/68‑1 (MQ=255) ccGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt < 1:22340416/68‑1 (MQ=255) cGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAtt < 1:13265128/68‑1 (MQ=255) ccTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGa > 1:30221084/1‑68 (MQ=255) tGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaaa < 1:31742915/68‑1 (MQ=255) gAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAAc < 1:16854831/68‑1 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa > 1:7557865/1‑68 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa > 1:11284430/1‑68 (MQ=255) aagcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaaga > 1:1706915/1‑68 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:18512598/68‑1 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:18060220/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:11055083/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:670924/1‑68 (MQ=255) aagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaag < 1:13415915/66‑1 (MQ=255) aagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGtt < 1:16028848/68‑1 (MQ=255) gagTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTa > 1:14127976/1‑67 (MQ=255) gagTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTa > 1:31157044/1‑67 (MQ=255) gagTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTa > 1:5559124/1‑67 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:32040850/1‑66 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:28061252/1‑66 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATc < 1:27132264/67‑1 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATc < 1:10494058/67‑1 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATc < 1:22576231/67‑1 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGGTAt > 1:27244837/1‑66 (MQ=255) tGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:23133695/1‑65 (MQ=255) ggTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTg < 1:31491906/68‑1 (MQ=255) ggTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTg > 1:24010198/1‑68 (MQ=255) ttAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:26829264/1‑68 (MQ=255) atagcgggataacattccttatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt < 1:18653871‑M2/39‑1 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGCGCGATTATGAAACAAGAAGTTATCCTGGt > 1:3331502‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:3684831‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:4885309‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:10021780‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:9807785‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:18868635‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:18311039‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:25697500‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:22959060‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:14907904‑M1/1‑67 (MQ=255) GCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTAc < 1:5824058‑M1/67‑1 (MQ=255) GCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTAc < 1:27886131‑M1/67‑1 (MQ=255) GCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTAc < 1:16578802‑M1/67‑1 (MQ=255) CGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCg < 1:12599815‑M1/68‑1 (MQ=255) CGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCg < 1:29718231‑M1/68‑1 (MQ=255) CGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCg < 1:24331076‑M1/68‑1 (MQ=255) ATAAGCAATGTTATCCGGCTATATTGCAGGGGCGATTATGAAACAAGAAGTTATCCTGGTACTCGAc > 1:8005789‑M1/1‑67 (MQ=255) ATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGAc > 1:11671606‑M1/1‑67 (MQ=255) ATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGAc > 1:24840190‑M1/1‑67 (MQ=255) AAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACtgt > 1:6859696‑M1/1‑68 (MQ=255) cAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGgc > 1:21314129/1‑68 (MQ=255) cAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGgc > 1:2563616/1‑68 (MQ=255) aaTGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGgc > 1:19292805/1‑67 (MQ=255) tGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGcgcg > 1:4395333/1‑68 (MQ=255) gTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGcgcg > 1:28361863/1‑67 (MQ=255) gTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGcgcg > 1:30453758/1‑67 (MQ=255) gTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGcgcg > 1:25227731/1‑67 (MQ=255) gTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGcgcg > 1:9389675/1‑67 (MQ=255) ttatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGCCTGTGGCGCGa > 1:17782623‑M2/12‑67 (MQ=255) tctccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:23416847‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAcc > 1:19678133‑M2/11‑68 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:2671671‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:5438231‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:14520709‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:30581203‑M2/57‑1 (MQ=255) atccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCa > 1:5105127‑M2/10‑68 (MQ=255) ccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAt > 1:26507406‑M2/8‑68 (MQ=255) ccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAt < 1:4483301‑M2/61‑1 (MQ=255) ccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAt > 1:1558432‑M2/8‑68 (MQ=255) ccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAt > 1:15796128‑M2/8‑68 (MQ=255) ccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAt < 1:21785243‑M2/61‑1 (MQ=255) ccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAt > 1:5985860‑M2/8‑68 (MQ=255) ccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAt < 1:20894210‑M2/61‑1 (MQ=255) cggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATg < 1:12172980‑M2/62‑1 (MQ=255) ggctaTATTGCAGGAGCGATTATGAAACAAGCAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGt < 1:29391681‑M2/63‑1 (MQ=255) ggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATg > 1:20383839‑M2/6‑67 (MQ=255) ggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATg > 1:26215702‑M2/6‑67 (MQ=255) ggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGAATGTGGCGCGACCAATg > 1:19742694‑M2/6‑67 (MQ=255) taTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAg > 1:9046414‑M2/3‑68 (MQ=255) aTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAgg < 1:23587842‑M2/67‑1 (MQ=255) aTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAgg < 1:25453227‑M2/67‑1 (MQ=255) | GGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAGGG > CP009273/2930744‑2930878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |