| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4161825 = | NA (NA) | 9 (0.030) | 4/96 | NT | 100% | intergenic (+141/‑160) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | CP009273 | 4161830 = | 0 (0.000) | intergenic (+146/‑155) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding | |||||
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTT > CP009273/4161764‑4161897 | aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctg > 1:20422159‑M2/67‑67 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctg > 1:18034549‑M2/67‑67 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:19359673‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:2324929‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:23474166‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:24368400‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:30634679‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:24727426‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:2138772‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:24991804‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:4479218‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:26038608‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:6727405‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:1490735‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:10456289‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:25320093‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:14850151‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:7392324‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:2517376‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:16106506‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:8849760‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcaggttatcgcgggcgtcctGc < 1:23267105‑M2/2‑1 (MQ=255)aaaaggccatccggcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:2040310‑M2/2‑1 (MQ=255)aaaagcccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:17396578‑M2/2‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:9373671‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:25350023‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:12169722‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc > 1:4512723‑M2/66‑67 (MQ=255) catccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCAt < 1:20048640‑M2/9‑1 (MQ=255) tggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGc < 1:21330328‑M2/21‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:25758107‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:3043241‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:9750153‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcccGCCCGCCATAAACTGCCAGGCATCaa < 1:13335292‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcggcctGCCCGCCATAAACTGCCAGGCATCaa < 1:32013184‑M2/26‑1 (MQ=255) ctgcttaatttcctgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCACCAAAt < 1:23092808‑M2/28‑1 (MQ=255) ttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCAAATTaa < 1:22436978‑M2/31‑1 (MQ=255) ttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCAAATTaa < 1:8909195‑M2/31‑1 (MQ=255) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:28607005/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:27150333/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:26938582/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:26495911/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:31643867/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:5940053/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:11051557/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:2500142/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:23715765/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:23347435/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:22165729/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:16657641/1‑68 (MQ=33) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:720154/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt < 1:12491570/68‑1 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:24192956/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:23034133/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:20438993/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:20514370/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:6126184/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:18128293/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:21216550/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:7099952/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCGGACGGATGGCCTTTTTGCGtg > 1:1462889/1‑67 (MQ=16) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:15676704‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:17925746‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:7444531‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:9783561‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:25785559‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:6294623‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:20193368‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:3925830‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:31685234‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:22235289‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:2461219‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:25791126‑M2/68‑3 (MQ=255) | GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTT > CP009273/4161764‑4161897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |