| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3701775 = | 85 (0.180) | 7 (0.020) | 7/88 | NT | 7.5% | intergenic (‑710/+201) | dppA/proK | dipeptide transporter/tRNA‑Pro |
| ? | CP009273 | 3701802 = | 107 (0.290) | intergenic (‑737/+174) | dppA/proK | dipeptide transporter/tRNA‑Pro | |||||
Only 100 of 146 total aligned reads displayed.
CGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3701853‑3701775‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcaggcttttCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGC > CP009273/3701802‑3701868 CGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACG < 1:32268115/68‑1CGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACG < 1:25184848/68‑1 GCAGGGCGAGCCACTAAGTGGCGAGTAATCCTCTATCACCGACCAAAATCGAAAAGCCTGCTCAACGA < 1:35806664/68‑1 GCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGA < 1:8509033/68‑1 GCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGA < 1:5372684/68‑1 GCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGA < 1:27667782/68‑1 GCAGAGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGA < 1:19398425/68‑1 AGGGCGAGCCACGAAGTGGCGAGTACTCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGA > 1:18865034/1‑66 AGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGC > 1:12633210/1‑68 AGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGC > 1:50703/1‑68 AGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGC > 1:21450494/1‑68 AGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGC > 1:28782179/1‑68 AGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGC > 1:26422236/1‑68 AGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGA > 1:34486430/1‑66 AGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTAGAAAAGCCTGCTCAACGAGC > 1:1240907/1‑68 GGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCA > 1:33884872/1‑68 GGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAG > 1:28113857/1‑68 GGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAG > 1:38347100/1‑68 GCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGCCCAAATTCGAAAAGCCTGCTCACCGAGCAG > 1:33524310/1‑67 GCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGG > 1:35748882/1‑68 GCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAG < 1:30649679/67‑1 GCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAG > 1:21331317/1‑67 GCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAG > 1:28700923/1‑67 GCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAG > 1:25881788/1‑67 GCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAG > 1:32704961/1‑67 GCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGC < 1:3643739/65‑1 CGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGG < 1:10712300/67‑1 CGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGG < 1:27262696/67‑1 CGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGG < 1:13869909/67‑1 CGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGG < 1:11445922/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:4861247/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:9244408/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:7882318/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:26543699/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:7387515/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:6520051/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:39429266/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:39335158/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:37333982/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:30508383/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:35407317/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:15853219/67‑1 GAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:11246236/67‑1 GAGCCACGAAGGGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:12043364/67‑1 GCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTT < 1:16564486/67‑1 GCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTT < 1:15245932/67‑1 GCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTT < 1:17943593/67‑1 CCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTT > 1:13426186/1‑68 CCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTT > 1:16695045/1‑68 CCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTT > 1:33145448/1‑68 CACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTT < 1:10232864/67‑1 CACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTT < 1:20676210/66‑1 CACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTT < 1:922446/66‑1 CACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACCAGCAGGCTTTT < 1:36563056/67‑1 CACGAAGTGGCGAGTAATCCTCTATCACCGACCAAAACCGTACAGCCAGCTCAACGAGCAGGCTTT < 1:17834603/66‑1 GAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTCGAA < 1:5113787/68‑1 GGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTCGAATTTG < 1:28791575/67‑1 GAGTAATCCTCTATCACCGACCAAATTCGAAAACCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCG < 1:1719574/68‑1 TCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGC < 1:36881329/43‑1 TCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGG < 1:34565828/42‑1 ACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATT > 1:38129882/1‑66 CTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGC < 1:23335581/67‑1 CGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGG > 1:21739482/1‑67 GAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCC > 1:25812758/1‑68 GAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCC < 1:24719461/68‑1 GAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCC > 1:23044606/1‑68 AGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCG > 1:14151218/1‑68 AGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCG > 1:2528027/1‑68 AGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCG > 1:8967957/1‑68 AGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCG > 1:21960788/1‑68 AGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCG > 1:31288067/1‑68 GCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGT > 1:33283508/1‑68 GCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGT > 1:17262726/1‑68 GCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGT > 1:37738409/1‑68 GCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGT > 1:7900395/1‑68 GCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCG < 1:4406309/67‑1 GCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCACGCCCTGCGGGCCGT > 1:15389559/1‑68 GCAGGCTTTTCGAATTTGGTCGGGGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCG < 1:15874854/67‑1 CAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTT > 1:33857553/1‑68 CAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTT > 1:14846187/1‑68 CAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTT > 1:6560886/1‑68 CAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGG > 1:29812201/1‑63 CAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCCCAACTTCGTGGCTCGCCCTGCGGGCCGTT > 1:29469889/1‑68 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTG > 1:12352049/1‑68 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTG > 1:10441999/1‑68 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTG > 1:27442245/1‑68 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTG > 1:35260621/1‑68 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTG > 1:12637662/1‑68 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTG > 1:31099503/1‑68 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTG > 1:36523124/1‑68 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGC < 1:29320282/66‑1 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGC < 1:33180477/66‑1 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTG < 1:14954291/65‑1 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTG < 1:11985699/65‑1 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTG < 1:28477490/65‑1 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTG < 1:17119251/65‑1 CTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCAACTTCGTGGCTCGCCCAGCGGGCAGTTGCTG > 1:6850332/1‑68 TTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGC < 1:38584524/68‑1 TTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGC < 1:28295333/68‑1 TCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGC < 1:18208507/68‑1 CGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCAACGAGCAGGCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3701853‑3701775‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcaggcttttCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGC > CP009273/3701802‑3701868 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |