| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3820789 | NA (NA) | 3 (0.010) | 3/98 | NT | NA | intergenic (+138/+31) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter |
| ? | CP009273 | = 3820811 | NA (NA) | intergenic (+160/+9) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter | |||||
Only 100 of 834 total aligned reads displayed.
AAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTA > CP009273/3820722‑3820856 | aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:21762201/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:11637521/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:26297449/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:38504355/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:26917062/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:28432893/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:31625613/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCCAAGCCTAACAGCCATTTGTCTttgtt > 1:10395285/1‑67 (MQ=255) ttCAATAAATTCTGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTgcg < 1:4961416‑M1/68‑4 (MQ=255) aTAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTgcggcg > 1:17887342‑M1/1‑61 (MQ=255) aaaTTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCa < 1:23240079/68‑1 (MQ=255) aaTTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCAc < 1:3640490/68‑1 (MQ=255) aTTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACt < 1:33695427/68‑1 (MQ=255) aTTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACt < 1:38825694/68‑1 (MQ=255) aTTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACt < 1:2255080/68‑1 (MQ=255) tATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACt > 1:5259366/1‑66 (MQ=255) tCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCG < 1:27328848‑M2/67‑1 (MQ=255) tCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCG < 1:11042841‑M2/67‑1 (MQ=255) aaTACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCC < 1:2058344‑M2/67‑1 (MQ=255) aTACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGC > 1:25436096‑M2/1‑68 (MQ=255) tACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt > 1:35506910/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:14609872/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:24187870/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:30382377/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:15294031/1‑68 (MQ=255) ggCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCg > 1:10091633/1‑68 (MQ=255) ggCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCg > 1:39479192/1‑68 (MQ=255) ggCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCG < 1:39103196‑M2/60‑1 (MQ=255) gCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCgg > 1:33280006/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCg < 1:18233665/66‑1 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGt > 1:14303611/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGt > 1:356750/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGt > 1:12695602/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:34497333/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:14077183/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:29933471/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:30769636/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:4504476/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:16753572/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:823047/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:21350635/1‑68 (MQ=255) tAAGCGAAGCGGATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:37141722/1‑68 (MQ=255) aagcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCg > 1:11430461/1‑68 (MQ=255) agcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCg > 1:5794814/1‑67 (MQ=255) agcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCg > 1:37411737/1‑67 (MQ=255) agcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCg > 1:32818273/1‑67 (MQ=255) agcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCg > 1:22161409/1‑67 (MQ=255) agcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCCCTTCATCGGTTAACCg > 1:13876980/1‑67 (MQ=255) agcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACATCTACCGCCGCTTCATCGGTTAACCg > 1:18955219/1‑67 (MQ=255) gcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGc > 1:24436750/1‑68 (MQ=255) cgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCa > 1:36751300/1‑68 (MQ=255) gaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTTCCGCCGCTTCATCGGTTAACCGGCaa > 1:15062813/1‑68 (MQ=255) aGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGcc > 1:6192733/1‑66 (MQ=255) aGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCa > 1:23484717/1‑67 (MQ=255) aGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCa > 1:12437269/1‑67 (MQ=255) aGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCa > 1:25048990/1‑67 (MQ=255) ggCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAAc > 1:20138711/1‑68 (MQ=255) ggCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAAc > 1:13681368/1‑68 (MQ=255) gCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:25891683/1‑68 (MQ=255) gCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:32160998/1‑68 (MQ=255) gCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCCGCAAAAATCGGCAACa > 1:8985075/1‑68 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAAc < 1:21119216/66‑1 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAAc < 1:748315/66‑1 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:31200676/1‑67 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:4146812/1‑67 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:549968/1‑67 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa < 1:19171198/67‑1 (MQ=255) agttGTCTTTGATGCGTCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:9516650/65‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:15807416/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:19557335/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:6877615/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:6996234/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:340365/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:37662229/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:35963499/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:35127189/67‑1 (MQ=255) aTTTGACTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:26107326/67‑1 (MQ=255) ttGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCaa < 1:28842754/68‑1 (MQ=255) ttGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCaa < 1:28159551/68‑1 (MQ=255) tCTTTGCTGCGGCGGCACTTCTACCGCGGCTTCATCGGTTAACCAGCAAAAATCGGCAACATCAAAt > 1:26615498/1‑67 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAAc < 1:31975794/68‑1 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAAc < 1:17269300/68‑1 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAAc < 1:12210282/68‑1 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAAc < 1:13124756/68‑1 (MQ=255) ttgCGGCGGCACTTCTACCGCCGCTTCATCGTTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:38139060/68‑1 (MQ=255) ttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt > 1:785838/1‑68 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:8543354/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:16238056/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:1757129/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:24797265/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:15585324/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:19761492/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:23071202/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:2386136/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:27710467/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:3259286/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:34766298/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTa > 1:6549563/1‑68 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTa > 1:20878990/1‑68 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTa > 1:29416431/1‑68 (MQ=255) | AAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTA > CP009273/3820722‑3820856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |