| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3847022 = | NA (NA) | 8 (0.020) | 5/88 | NT | NA | intergenic (+20/‑260) | tisB/emrD | toxic membrane persister formation peptide, LexA‑regulated/multidrug efflux system protein |
| ? | CP009273 | 3847050 = | NA (NA) | intergenic (+48/‑232) | tisB/emrD | toxic membrane persister formation peptide, LexA‑regulated/multidrug efflux system protein | |||||
Only 100 of 1121 total aligned reads displayed.
GTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGAC > CP009273/3846955‑3847089 | tgCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCaa < 1:10409154/67‑1 (MQ=255) tgCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCaa < 1:23725494/67‑1 (MQ=255) tgCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCaa < 1:21996414/67‑1 (MQ=255) tgCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCaa < 1:20750475/67‑1 (MQ=255) agagatggtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataaaa < 1:969830‑M1/3‑1 (MQ=255) agagatggtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataaaa < 1:23163361‑M1/3‑1 (MQ=255) gagatggtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAg < 1:1824400‑M1/4‑1 (MQ=255) agcaCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAggg > 1:36439284/1‑68 (MQ=255) agcaCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAggg > 1:11727503/1‑68 (MQ=255) agcaCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAggg > 1:18584551/1‑68 (MQ=255) agcaCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAggg > 1:16198739/1‑68 (MQ=255) agcaCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAgg < 1:39198748/67‑1 (MQ=255) caCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGa > 1:7627310/1‑68 (MQ=255) ggtagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGa < 1:34151998‑M1/8‑1 (MQ=255) aCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAGGTCGCACCAAAGGGGa > 1:27390254/1‑67 (MQ=255) aCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGa > 1:21221567/1‑67 (MQ=255) aCTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGa > 1:39419815/1‑67 (MQ=255) cTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGc < 1:35807774/68‑1 (MQ=255) tagggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGAGc > 1:19639497‑M1/58‑67 (MQ=255) agggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGAGCgg < 1:36076437‑M1/12‑1 (MQ=255) agggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGAGCgg < 1:32461923‑M1/12‑1 (MQ=255) agggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGGAGCgg < 1:622717‑M1/12‑1 (MQ=255) agggcggataagatgcgtcagcatcgcatccgacaccaacccgcacgctaaatataAAAGGGCAGCgg < 1:25849817‑M1/12‑1 (MQ=255) aaCTGCTTGATGCTGTTCTGGAATACCTGAAGGGATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGa > 1:26893581/1‑68 (MQ=255) aaCTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGa > 1:13080055/1‑68 (MQ=255) aCTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGaa > 1:22382923/1‑68 (MQ=255) aCTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGaa > 1:33411493/1‑68 (MQ=255) tGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGaaa > 1:30594475/1‑67 (MQ=255) tGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGaaa > 1:654796/1‑67 (MQ=255) tGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGaaa > 1:8550866/1‑67 (MQ=255) gCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCCAGTCGCACCAAAGGGGAGCGGGAAAcc < 1:26600092/68‑1 (MQ=255) gCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAAcc < 1:25667514/68‑1 (MQ=255) gCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAAcc < 1:30188305/68‑1 (MQ=255) cTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAAcc > 1:15303284/1‑67 (MQ=255) cTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAAcc > 1:17533051/1‑67 (MQ=255) aTGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTc > 1:1910084/1‑67 (MQ=255) tGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcc < 1:28084883/67‑1 (MQ=255) tGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcc < 1:7916402/67‑1 (MQ=255) gcggTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcc > 1:28501434/4‑66 (MQ=255) gCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcccc < 1:32819259/68‑1 (MQ=255) gCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcccc < 1:33792557/68‑1 (MQ=255) gCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcccc < 1:27742867/68‑1 (MQ=255) gCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcc > 1:14157240/1‑66 (MQ=255) gCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcc > 1:24615855/1‑66 (MQ=255) gCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcc > 1:38187154/1‑66 (MQ=255) gCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTcc > 1:15878889/1‑66 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:24943387/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:37942923/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:5939946/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:20144806/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:27155744/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:19393220/67‑1 (MQ=255) tGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCt < 1:12154863/67‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:35120366/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:27585039/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:9210964/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:24161038/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:20425360/68‑1 (MQ=255) gTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCttt < 1:1137387/68‑1 (MQ=255) tCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTta > 1:30966863/1‑68 (MQ=255) tGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTtata < 1:8920375/68‑1 (MQ=255) tGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTtata < 1:23570786/68‑1 (MQ=255) tGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTtata < 1:5075529/68‑1 (MQ=255) aaTACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:26207059/1‑68 (MQ=255) aaTACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:3757591/1‑68 (MQ=255) aaTACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:4800903/1‑68 (MQ=255) aaTACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:25423526/1‑68 (MQ=255) aaTACCTGAAGTAATTCAGATCCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:1452556/1‑68 (MQ=255) aaTACCTGAAGTAATNCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATAttt > 1:10057927/1‑68 (MQ=255) aCCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGc < 1:35420537/68‑1 (MQ=255) aGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCgg > 1:12513424/1‑68 (MQ=255) aGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCgg > 1:31407765/1‑68 (MQ=255) gTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg > 1:29984434/1‑68 (MQ=255) gTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg > 1:6827773/1‑68 (MQ=255) taTTCAGATTCAAGTCGCACCAAAGTTGAGCTGGAAACCGCTCCCCTTTTATATTTAGCGTGCgtg < 1:16970848/65‑3 (MQ=255) ccaacccgcacgctaaatataAAAGGGGAGCGGGAAACCGCTCCCCGTTTATATTTAGCGGGCGGGtt < 1:13568620‑M1/47‑1 (MQ=255) aaTTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg < 1:15612902/66‑1 (MQ=255) aaTTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg < 1:29131711/66‑1 (MQ=255) aaTTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg < 1:28774435/66‑1 (MQ=255) aaTTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg < 1:21549257/66‑1 (MQ=255) aaTTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCggg < 1:10867471/66‑1 (MQ=255) ttCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTgg > 1:16600976/1‑68 (MQ=255) tCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgt < 1:12760794/68‑1 (MQ=255) tCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgt > 1:32112000/1‑68 (MQ=255) tCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgt < 1:38640778/68‑1 (MQ=255) tCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgt > 1:7361940/1‑68 (MQ=255) cccgcacgctaaatataAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgtg < 1:4311341‑M1/51‑1 (MQ=255) cAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgtg < 1:4097753/68‑1 (MQ=255) ttCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgtgt < 1:34816894/65‑1 (MQ=255) ttCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgtgt < 1:38920519/65‑1 (MQ=255) ttCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGgtgt < 1:29607865/65‑1 (MQ=255) ttCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTc < 1:31807691/66‑1 (MQ=255) ttCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCgg > 1:32999766/1‑68 (MQ=255) gTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGgatgcg > 1:11189529/1‑68 (MQ=255) gTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGgatgcg > 1:34505872/1‑68 (MQ=255) cGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGgatgcgat < 1:22935881/68‑1 (MQ=255) cGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGgatgcgat < 1:14974434/68‑1 (MQ=255) cGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGgatgcg < 1:17959766/66‑1 (MQ=255) ccAAAGGGGAGCGGTAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTg < 1:37007025/68‑1 (MQ=255) AAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGAc < 1:5356716‑M1/68‑1 (MQ=255) | GTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAATTCAGATTCAAGTCGCACCAAAGGGGAGCGGGAAACCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGAC > CP009273/3846955‑3847089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |