New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	725814 =	NA (NA)	7 (0.020)	6/96	NT	NA	coding (776/4194 nt)	rhsC	Rhs family putative polymorphic toxin
	?	CP009273	725875 =	NA (NA)					coding (837/4194 nt)	rhsC	Rhs family putative polymorphic toxin

GTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCA  >  CP009273/725747‑725823                                                                    |          gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:1146915/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:25663323/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:36673459/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:37665405/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:38666311/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:4894828/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:7556150/68‑1 (MQ=35) gTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:8090005/68‑1 (MQ=35) gTGACGGAGGGTGCCGGGCGTCACTTCCGGCGGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGc           <  1:20217796/68‑1 (MQ=255)   gACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGccc         >  1:7340428/1‑68 (MQ=35)   gACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGcc          <  1:16474577/67‑1 (MQ=35)   gACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGcc          <  1:28095661/67‑1 (MQ=35)     cGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCg        <  1:5800018/67‑1 (MQ=35)     cGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCg        <  1:39575620/67‑1 (MQ=35)     cGGATGGCGCCGGGCGTCACTTCCGGCGGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCg        <  1:31973786/67‑1 (MQ=255)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGTCAGAAGACGCCCGgc      >  1:6456389/1‑68 (MQ=255)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      >  1:8186689/1‑68 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      >  1:36411966/1‑68 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      <  1:34943176/68‑1 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      >  1:26412981/1‑68 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      <  1:23988286/68‑1 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      <  1:22741859/68‑1 (MQ=35)      ggATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      <  1:18232795/68‑1 (MQ=35)      ggAGGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgc      <  1:38469083/68‑1 (MQ=25)        cttgTGCCGGGCGTCTCTTCCGGCTGGTACTTACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca     <  1:35489429/64‑1 (MQ=11)        aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca     <  1:28311441/67‑1 (MQ=35)        aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca     >  1:38901533/1‑67 (MQ=35)        aTGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca     >  1:19534766/1‑67 (MQ=35)         tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcag    <  1:1718338/67‑1 (MQ=35)         tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcacc   <  1:25931964/68‑3 (MQ=25)         tGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcacc   <  1:2041400/68‑3 (MQ=25)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGCCCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagcc  >  1:20726397/1‑67 (MQ=255)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:14455600/1‑68 (MQ=35)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:15421353/1‑68 (MQ=35)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:1656860/1‑68 (MQ=35)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:4790259/1‑68 (MQ=35)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:23838837/1‑68 (MQ=35)          ggTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgcagca  >  1:32883803/1‑68 (MQ=35)                                                                    |          GTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCA  >  CP009273/725747‑725823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.