| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3202572 | 451 (0.950) | 40 (0.100) | 10/92 | NT | 10.8% | coding (1190/1464 nt) | ttdT | L‑tartrate/succinate antiporte |
| ? | CP009273 | = 3202615 | 290 (0.740) | coding (1233/1464 nt) | ttdT | L‑tartrate/succinate antiporte | |||||
Only 100 of 637 total aligned reads displayed.
TCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCC > CP009273/3202505‑3202638 | cGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGcc > 1:29549903/1‑68 (MQ=255) cGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGcc < 1:24402118/68‑1 (MQ=255) cGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGcc < 1:15021821/68‑1 (MQ=255) gCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGcc > 1:38110043/1‑67 (MQ=255) cAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCAc < 1:37117931/67‑1 (MQ=255) aCGATGGTTATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:11502705/68‑1 (MQ=255) aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:9036643/68‑1 (MQ=255) aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:27171744/68‑1 (MQ=255) aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:19695422/68‑1 (MQ=255) aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:10024540/68‑1 (MQ=255) aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:20646869/68‑1 (MQ=255) aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:254298/68‑1 (MQ=255) aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:13975811/68‑1 (MQ=255) aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:22359663/68‑1 (MQ=255) aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:13519328/68‑1 (MQ=255) aCGATGGTGATGGTGGCGTTGATTGTAGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGc < 1:29017677/68‑1 (MQ=255) cGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCg < 1:3721612/68‑1 (MQ=255) gctggtgatggtgGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGt < 1:808920/66‑1 (MQ=255) gatggtgatggtGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGt < 1:33870903/68‑1 (MQ=255) gatggtgatggtGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGt < 1:25049811/68‑1 (MQ=255) gatggtgatggtGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGt < 1:15197023/68‑1 (MQ=255) gatggtgatggtGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGt < 1:25778462/68‑1 (MQ=255) gatggtgatggtGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGt < 1:12647787/68‑1 (MQ=255) gatggtgatggtGGCGTTGATTGTGGTGATTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGt < 1:17819199/68‑1 (MQ=255) tggtgatggtgGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGtat > 1:3858232/1‑68 (MQ=255) ggtgatggtgGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGtat > 1:15816499/1‑67 (MQ=255) gtgatggtgGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGtata > 1:26414118/1‑67 (MQ=255) tgatggtgGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGtata > 1:4106080/1‑66 (MQ=255) gatggtgGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATAcc > 1:30965159/1‑67 (MQ=255) gatggtgGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATAcc < 1:31458829/67‑1 (MQ=255) tggtggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTcc > 1:36998187/1‑68 (MQ=255) gtggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTcc > 1:6618545/1‑66 (MQ=255) gtggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTcc > 1:7142935/1‑66 (MQ=255) gtggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTcc > 1:32072614/1‑66 (MQ=255) tggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGc > 1:14411962/1‑67 (MQ=255) tggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGc > 1:30255746/1‑67 (MQ=255) ggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTTGCCAGCGCCACGGCGTATACCTCCGct < 1:26613060/67‑1 (MQ=255) ggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGct < 1:1028358/67‑1 (MQ=255) ggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGct < 1:24750350/67‑1 (MQ=255) ggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGct < 1:33548161/67‑1 (MQ=255) ggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGct < 1:35441188/67‑1 (MQ=255) ggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGct < 1:20335146/67‑1 (MQ=255) ggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGct < 1:1477936/67‑1 (MQ=255) ggCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGct < 1:37535142/67‑1 (MQ=255) ggCGTTGATTGTGGTGTGTTATCTACTGCGCTACTTTTTCGCCAGCGCagcagcaatcatcatcggt < 1:11195399‑M1/67‑20 (MQ=255) gTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCg < 1:9479135/68‑1 (MQ=255) tGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGc > 1:1195529/1‑67 (MQ=255) tGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGc > 1:30566549/1‑67 (MQ=255) gATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCAc < 1:13778297/68‑1 (MQ=255) ttGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCAcc < 1:31821877/67‑1 (MQ=255) tgtgGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCga < 1:34705972/68‑1 (MQ=255) tgtgGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCga < 1:22911983/68‑1 (MQ=255) tgtgGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCga < 1:12910850/68‑1 (MQ=255) ggtgTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCgatga < 1:16638816/68‑1 (MQ=255) gtgtTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCgatgat > 1:2727449/1‑68 (MQ=255) gtgtTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCgatgat > 1:32929789/1‑68 (MQ=255) gtgtTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCgatgat > 1:19908810/1‑68 (MQ=255) ttttATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCg < 1:3787188/55‑1 (MQ=255) tttATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGAtt > 1:17044278/1‑68 (MQ=255) tttATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCACGCACCGATGATGAtt > 1:8711538/1‑68 (MQ=255) tATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGAtt > 1:18949693/1‑66 (MQ=255) aTCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGAtt > 1:33301583/1‑65 (MQ=255) aTCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATttct < 1:10557493/68‑1 (MQ=255) aTCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATtgct < 1:4918491/68‑1 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCagcagcaatcatcatcggtgcgagagcggaggtatacgccgt > 1:24060873‑M1/1‑26 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCagcagcaatcatcatcggtgcgagagcggaggtatacgccgt > 1:18575970‑M1/1‑26 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCagcagcaatcatcatcggtgcgagagcggaggtatacgccgt > 1:32480209‑M1/1‑26 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCagcagcaatcatcatcggggcgagagcggaggtatacgccgt > 1:36062918‑M1/1‑26 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATtgct > 1:6267889/1‑66 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATtgct > 1:13246521/1‑66 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATtgct > 1:27627942/1‑66 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATtgct > 1:28223377/1‑66 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATtgct > 1:21009650/1‑66 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATtgct > 1:21544888/1‑66 (MQ=255) cTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATtgct > 1:12345038/1‑66 (MQ=255) aCTGCGCTACTTTTTCGCCAGCGCagctgcaatcatcatcggtgcgagagcggaggtatacgccgtg > 1:23751858‑M1/1‑24 (MQ=255) gcgcTACTTTTTCGCCAGCGCagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggc > 1:37642957‑M1/1‑21 (MQ=255) gcgcTACTTTTTCGCCAGCGCagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggc > 1:29890357‑M1/1‑21 (MQ=255) tACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTgcgctggc > 1:8416600‑M2/1‑60 (MQ=255) tACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTgcgctgg > 1:5366858‑M2/1‑60 (MQ=255) aCTTTTTCGCCAGCGCGTGGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTgcgctggcg > 1:22497151‑M2/1‑59 (MQ=255) tttttCGCCAGCGCagcagcaatcctcgtcggtgcgagagcggaggtgtacgccgtggcgctggcgaa > 1:39027631‑M1/1‑14 (MQ=255) tttttCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGAt > 1:23481108/1‑68 (MQ=255) tttCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGc < 1:19086313/68‑1 (MQ=255) tttCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGc < 1:4646288/68‑1 (MQ=255) ttCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTgcgctggcgaaaaa > 1:382907‑M2/1‑54 (MQ=255) ccAGCGCagcagcaatcatcatcggtgcgagagcggaggtatacgctgtggcgctggcgaaaaagta > 1:7695834‑M1/1‑7 (MQ=255) ccAGCGCagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggcgctggcgaaaaagta > 1:18464049‑M1/1‑7 (MQ=255) ccAGCGCagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggcgctggcgaaaaagta > 1:5542520‑M1/1‑7 (MQ=255) ccAGCGCagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggcgctggcgaaaaagta > 1:22034687‑M1/1‑7 (MQ=255) cAGCGCagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggcgctggcgaaaaagtagc < 1:5817200‑M1/68‑63 (MQ=255) cAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTgcgctggcgaaaaagtagc > 1:9657478‑M2/1‑49 (MQ=255) cAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTgcgctggcgaaaaagtagc > 1:34252372‑M2/1‑49 (MQ=255) gcgcagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggcgctggcgaaaaagtagcgc > 1:20155813‑M1/1‑4 (MQ=255) cgcagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggcgctggcgaaaaagtagcgca > 1:39506037‑M1/1‑3 (MQ=255) gcagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggcgctggcgaaaaagtagcgcag > 1:16061932‑M1/1‑2 (MQ=255) gcagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggcgctggcgaaaaagtagcgcag > 1:17445443‑M1/1‑2 (MQ=255) gcagcagcaatcatcatcggtgcgagagcggaggtatacgccgtggcgcaggcgaaaaagtagcgcag > 1:23274185‑M1/1‑2 (MQ=255) gcagcagcaatcatcatcggtgcgagagccgaggtatacgccgtggcgctggcgtaaaagtagcgcag > 1:28945342‑M1/1‑2 (MQ=255) gcCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTgcgctggcgaaaaagtagcgca > 1:36501245‑M2/1‑45 (MQ=255) | TCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCC > CP009273/3202505‑3202638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |