| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3758457 = | NA (NA) | 122 (0.260) | 4/110 | NT | 11.0% | coding (2915/4134 nt) | rhsA | Rhs family protein, putative polymorphic toxin; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor |
| ? | CP009273 | 3760580 = | 1003 (2.110) | intergenic (+41/‑1) | yibA/rhsJ | HEAT‑domain lethality reduction protein; putative immunity protein for putative polymorphic toxin RhsA/Rhs‑family protein | |||||
Only 100 of 1469 total aligned reads displayed.
GCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCT > CP009273/3760513‑3760647 | gCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACg < 1:9380696/68‑1 (MQ=255)gCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACg < 1:27711577/68‑1 (MQ=255) cTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACgg > 1:28467076/1‑68 (MQ=255) aaagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg < 1:3560010‑M2/1‑1 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt > 1:21376787/1‑68 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt > 1:2417147/1‑68 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt > 1:26447610/1‑68 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:26855701/68‑1 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:27085950/68‑1 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt > 1:37803111/1‑68 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:4208650/68‑1 (MQ=255) aagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:3329117‑M2/66‑66 (MQ=255) aagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:8320114‑M2/66‑66 (MQ=255) aagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:10003002‑M2/66‑66 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:38249267‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:6970021‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:7935045‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:23000857‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:10478523‑M2/65‑65 (MQ=255) aTTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTg < 1:18268193/68‑1 (MQ=255) tGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCa > 1:23295848/1‑68 (MQ=255) atagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:28816204‑M2/63‑63 (MQ=255) atagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:19620810‑M2/63‑63 (MQ=255) aTAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGa > 1:34724984/1‑68 (MQ=255) aTAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGa > 1:38386812/1‑68 (MQ=255) tAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt < 1:19392226/68‑1 (MQ=255) aGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt > 1:24610853/1‑66 (MQ=255) aGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt > 1:29611822/1‑66 (MQ=255) gCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGc > 1:19925824/1‑67 (MQ=255) aGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGAcc > 1:15225128/1‑68 (MQ=255) cGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCg > 1:14294514/1‑67 (MQ=255) cGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCg > 1:2539350/1‑67 (MQ=255) gTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGc < 1:35201086/68‑1 (MQ=255) tCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTg > 1:38715831/1‑68 (MQ=255) gCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAg > 1:39069948/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:24878222/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:25708221/1‑68 (MQ=255) gTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt < 1:17320498/67‑1 (MQ=255) gTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt < 1:5850431/67‑1 (MQ=255) gTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt < 1:28074615/67‑1 (MQ=255) aGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGaaa > 1:21562781/1‑68 (MQ=255) aGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGaaa > 1:9033752/1‑68 (MQ=255) gTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGaaa < 1:19119839/67‑1 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:3123026/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:761036/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:32049425/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:12783186/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:20995378/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:15864255/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATACTGGCTGa > 1:37559178/1‑67 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGCTGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:26051649/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:36639711/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:12538322/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:13576071/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:16873477/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:39349496/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:3266067/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:23759081/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:30796279/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:12065479/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc < 1:16317102/68‑1 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:29252592/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACAGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:29960938/1‑68 (MQ=255) aGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACTgg > 1:30483349/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:6187399/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:3422939/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:22673345/1‑68 (MQ=255) ggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg < 1:11695534/65‑1 (MQ=255) gggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtga < 1:34489938/67‑1 (MQ=255) gggATTCCCGCCGGCACGGTGCAGATGCGCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtga < 1:18827165/67‑1 (MQ=255) ggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagt > 1:33691222/1‑68 (MQ=255) ggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgag < 1:3239698/67‑1 (MQ=255) gATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagt < 1:22293813/67‑1 (MQ=255) gATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagt < 1:3722121/67‑1 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:32894975/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:5138430/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:15576978/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:5526982/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:13992960/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:17694881/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:10878485/1‑68 (MQ=255) ttCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga < 1:3597374/67‑1 (MQ=255) ttCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga < 1:21924410/67‑1 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:20787066‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:27380351‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:14723978‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:874374‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:11423295‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:33961502‑M2/9‑67 (MQ=255) ccgGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAg > 1:6609371/1‑67 (MQ=255) ggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgcc > 1:30213406‑M2/7‑68 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:20516315‑M2/4‑68 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:3159176‑M2/4‑68 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:25115476‑M2/4‑68 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:4789890‑M2/4‑68 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:37020196‑M2/4‑68 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:13196058‑M2/4‑68 (MQ=255) cACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgc < 1:4514456/67‑1 (MQ=35) aCGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc < 1:36321164/67‑1 (MQ=33) GGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCt < 1:20142772‑M2/68‑1 (MQ=255) | GCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCT > CP009273/3760513‑3760647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |