New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 4308345488 (1.030)30 (0.080) 10/94 NT 7.5% coding (237/759 nt) phnK carbon‑phosphorus lyase complex subunit, putative ATP transporter ATP‑binding protein
?CP009273 = 4308403 335 (0.840)coding (179/759 nt) phnK carbon‑phosphorus lyase complex subunit, putative ATP transporter ATP‑binding protein

Only 100 of 503 total aligned reads displayed.

ACGCAGCAGGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGATTCCC  >  CP009273/4308336‑4308469
                                                                   |                                                                  
aCGCAGCAGGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTccc                                                                    <  1:18309602/68‑1 (MQ=255)
 cGCAGCAGGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTccc                                                                    >  1:17499335/1‑67 (MQ=255)
  gcagcaGGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTccc                                                                    >  1:17179921/1‑66 (MQ=255)
    agcagGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcct                                                                 >  1:4323666‑M2/1‑64 (MQ=255)
    agcagGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcct                                                                 >  1:28063983‑M2/1‑64 (MQ=255)
     gcagGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcct                                                                 <  1:21137439‑M2/66‑4 (MQ=255)
     gcagGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcct                                                                 <  1:7117300‑M2/66‑4 (MQ=255)
     gcagGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcct                                                                 <  1:24920630‑M2/66‑4 (MQ=255)
     gcagGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcct                                                                 <  1:5755257‑M2/66‑4 (MQ=255)
     gcagGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcct                                                                 <  1:29977320‑M2/66‑4 (MQ=255)
     gcagGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcct                                                                 <  1:13262507‑M2/66‑4 (MQ=255)
       agGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcctgct                                                              <  1:6806254‑M2/67‑7 (MQ=255)
       agGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcctgc                                                               >  1:37544849‑M2/1‑61 (MQ=255)
       agGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcctg                                                                >  1:10569831‑M2/1‑61 (MQ=255)
          cgccggcggTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTgcg                                                           >  1:35732880/4‑67 (MQ=255)
          cGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcctgctgcg                                                           <  1:16366992‑M2/67‑10 (MQ=255)
          cGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcctgctgc                                                            >  1:11409660‑M2/1‑58 (MQ=255)
           gACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcctgctgcgt                                                          >  1:6153422‑M2/1‑57 (MQ=255)
           gACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTgcgg                                                          <  1:37959137/67‑1 (MQ=255)
           gACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTgcgg                                                          <  1:24176865/67‑1 (MQ=255)
            aCGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTgcggcg                                                        >  1:25691498/1‑68 (MQ=255)
              ggcggTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTc                                                      >  1:27507607/1‑68 (MQ=255)
               gcggTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCa                                                     >  1:17650307/1‑68 (MQ=255)
                cggTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcctgctgcgtaccga                                                     >  1:12927495‑M2/1‑52 (MQ=255)
                cggTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcctgctgcgtaccga                                                     >  1:4085474‑M2/1‑52 (MQ=255)
                cggTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcctgctgcgtaccga                                                     >  1:11051954‑M2/1‑52 (MQ=255)
                cggTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCcccgctgcgtaccga                                                     >  1:32019128‑M2/1‑52 (MQ=255)
                 ggTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAgg                                                   <  1:38538821/68‑1 (MQ=255)
                 ggTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAg                                                    >  1:9536393/1‑67 (MQ=255)
                     ggCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGgcgcg                                               <  1:8931487/68‑1 (MQ=255)
                     ggCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGgcgcg                                               <  1:30677157/68‑1 (MQ=255)
                     ggCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGgcgcg                                               <  1:23495029/68‑1 (MQ=255)
                     ggCCTCGCTCATTGCATACAGCGAACGGCTCACGTAGTGAATTTCCCcctgctgcgtaccgaatgggg                                               >  1:25940853‑M2/1‑47 (MQ=255)
                          cGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGgag                                          <  1:16763972/68‑1 (MQ=255)
                           gCTCATTGCATACCGCGCACGGGTCTCGTCGTGAATTTCCCcctgcggcgtaccgaatggggcgtggt                                         >  1:35191297‑M2/1‑41 (MQ=255)
                             tCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATc                                       >  1:15071165/1‑68 (MQ=255)
                             tCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATc                                       >  1:38162572/1‑68 (MQ=255)
                             tCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATc                                       >  1:19631586/1‑68 (MQ=255)
                               aTTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGa                                     <  1:22610479/68‑1 (MQ=255)
                               aTTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGa                                     <  1:39471447/68‑1 (MQ=255)
                               aTTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGa                                     <  1:19755301/68‑1 (MQ=255)
                               aTTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGa                                     <  1:7461933/68‑1 (MQ=255)
                               aTTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGa                                     <  1:24550791/68‑1 (MQ=255)
                               aTTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGa                                     <  1:2505132/68‑1 (MQ=255)
                                 tGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGCCt                                   >  1:3453886/1‑68 (MQ=255)
                                 tGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACt                                   >  1:31336580/1‑68 (MQ=255)
                                 tGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACt                                   <  1:29183280/68‑1 (MQ=255)
                                 tGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACt                                   >  1:13673215/1‑68 (MQ=255)
                                 tGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACt                                   >  1:12388069/1‑68 (MQ=255)
                                   cATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTc                                 >  1:12585233/1‑68 (MQ=255)
                                     tACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTca                                >  1:34201697/1‑67 (MQ=255)
                                     tACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTca                                >  1:36839164/1‑67 (MQ=255)
                                     tACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTca                                >  1:11937513/1‑67 (MQ=255)
                                     tACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTca                                >  1:4847931/1‑67 (MQ=255)
                                     tACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTca                                >  1:5385336/1‑67 (MQ=255)
                                     tACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTca                                >  1:15600772/1‑67 (MQ=255)
                                     tACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTca                                >  1:18544680/1‑67 (MQ=255)
                                     tACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTca                                >  1:10038715/1‑67 (MQ=255)
                                      aCAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTcagc                              <  1:19144794/68‑1 (MQ=255)
                                      aCAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTcagc                              >  1:26073021/1‑68 (MQ=255)
                                       cAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTcagca                             >  1:3777091/1‑68 (MQ=255)
                                        aGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTcagca                             >  1:18082515/1‑67 (MQ=255)
                                         gCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGCCTTCagcagc                           >  1:27037741/1‑68 (MQ=255)
                                         gCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCagcagc                           >  1:5003297/1‑68 (MQ=255)
                                         gCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCagcagc                           >  1:36333934/1‑68 (MQ=255)
                                         gCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCagcagc                           >  1:32286786/1‑68 (MQ=255)
                                         gCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCagcagc                           >  1:10855981/1‑68 (MQ=255)
                                         gCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCagcagc                           >  1:33983099/1‑68 (MQ=255)
                                         gCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCagcagc                           >  1:12101082/1‑68 (MQ=255)
                                           gAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGt                         <  1:1179376/68‑1 (MQ=255)
                                              cGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTgg                       >  1:21518522/1‑67 (MQ=255)
                                              cGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTgg                       >  1:20285937/1‑67 (MQ=255)
                                              cGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGt                      <  1:876694/68‑1 (MQ=255)
                                               ggTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTc                     <  1:18834067/68‑1 (MQ=255)
                                               ggTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTc                     <  1:28234050/68‑1 (MQ=255)
                                               ggTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTc                     <  1:14363612/68‑1 (MQ=255)
                                               ggTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTc                     <  1:33299435/68‑1 (MQ=255)
                                                  tctcGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCtt                   >  1:2306923/1‑67 (MQ=255)
                                                  tctcGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCtt                   >  1:4639861/1‑67 (MQ=255)
                                                  tctcGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTc                  <  1:23775643/68‑1 (MQ=255)
                                                     cGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCg               >  1:32584449/1‑68 (MQ=255)
                                                      gTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGt                      <  1:28537359/60‑1 (MQ=255)
                                                       tAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGa             >  1:37150711/1‑68 (MQ=255)
                                                       tAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGa             >  1:22063814/1‑68 (MQ=255)
                                                       tAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGa             >  1:25474864/1‑68 (MQ=255)
                                                       tAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGa             >  1:30319454/1‑68 (MQ=255)
                                                       tAGAGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGTGATCGACTTCAGCAGCGTGGTCGTCCCgg              >  1:3891071/1‑67 (MQ=39)
                                                          tGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGCGcc          >  1:39188952/1‑68 (MQ=255)
                                                           gAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGc           <  1:35390978/66‑1 (MQ=255)
                                                             aTTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCgg        <  1:31097195/67‑1 (MQ=255)
                                                             aTTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGa       <  1:19513803/68‑1 (MQ=255)
                                                             aTTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGa       >  1:33474333/1‑68 (MQ=255)
                                                              tttCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGAt      >  1:16897399/1‑68 (MQ=255)
                                                               ttCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGAtt     <  1:13921082/68‑1 (MQ=255)
                                                               ttCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGAtt     <  1:36396869/68‑1 (MQ=255)
                                                                tCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGAtt     >  1:14890062/1‑67 (MQ=255)
                                                                 cccccTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGATTcc   <  1:32820038/68‑1 (MQ=255)
                                                                  ccccTGCTGCGGCGTCAGGCGCGCGTAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGATTcc   >  1:8471570/1‑67 (MQ=255)
                                                                  ccccTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGATTcc   >  1:12726578/1‑67 (MQ=255)
                                                                  ccccTGCTGCGGCATCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGATTccc  <  1:26633044/68‑1 (MQ=255)
                                                                   |                                                                  
ACGCAGCAGGCGACGGCGGTCGGCCTCGCTCATTGCATACAGCGAACGGTTCTCGTAGTGAATTTCCCCCTGCTGCGGCGTCAGGCGCGCGGAGATCGACTTCAGCAGCGTGGTCTTCCCGGAGCCGGATTCCC  >  CP009273/4308336‑4308469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.